RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 ZFP36P26651 326 aaKnown RBP11.15□□□□□ -0.62
PBRM1-219ENST00000462207 GNB2P62879 340 aa11.15□□□□□ -0.62
PBRM1-219ENST00000462207 MRPS10P82664 201 aaKnown RBP11.15□□□□□ -0.62
PBRM1-219ENST00000462207 BTN2A1Q7KYR7 527 aa11.15□□□□□ -0.62
PBRM1-219ENST00000462207 GDPD1Q8N9F7 314 aa11.15□□□□□ -0.62
PBRM1-219ENST00000462207 SNAPC3Q92966 411 aa11.15□□□□□ -0.62
PBRM1-219ENST00000462207 THAP7Q9BT49 309 aaPredicted RBP11.15□□□□□ -0.62
PBRM1-219ENST00000462207 SSBP3Q9BWW4 388 aaPredicted RBP11.15□□□□□ -0.62
PBRM1-219ENST00000462207 IFT46Q9NQC8 304 aa11.15□□□□□ -0.62
PBRM1-219ENST00000462207 MTFP1Q9UDX5 166 aa11.15□□□□□ -0.62
PBRM1-219ENST00000462207 RNF223E7ERA6 249 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 SULT1C2O00338 296 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 ORC5O43913 435 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 IL7P13232 177 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 DTYMKP23919 212 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 ERP29P30040 261 aaKnown RBP11.14□□□□□ -0.63
PBRM1-219ENST00000462207 GDNFP39905 211 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 PAX5Q02548 391 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 ZNF273Q14593 569 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 ESCO2Q56NI9 601 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 FAM185AQ8N0U4 392 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 RAB39BQ96DA2 213 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 OCSTAMPQ9BR26 566 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 LPAR2Q9HBW0 351 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 Q9N2K0 584 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 ANAPC10Q9UM13 185 aa11.14□□□□□ -0.63
PBRM1-219ENST00000462207 ASH1LQ9NR48 2969 aaKnown RBP11.14□□□□□ -0.63
PBRM1-219ENST00000462207 TRBV6-6A0A0A6YYG2 114 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 A0A1W2PQ09 198 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 HMX3A6NHT5 357 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 USF1P22415 310 aaPredicted RBP11.13□□□□□ -0.63
PBRM1-219ENST00000462207 SSTR5P35346 364 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 RPL31P62899 125 aaKnown RBP11.13□□□□□ -0.63
PBRM1-219ENST00000462207 LCN2P80188 198 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 ZNF880Q6PDB4 577 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 PRSS57Q6UWY2 283 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 HOGA1Q86XE5 327 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 FOXC2Q99958 501 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 MBNL3Q9NUK0 354 aaKnown RBP11.13□□□□□ -0.63
PBRM1-219ENST00000462207 ABCA2Q9BZC7 2435 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 LINC00854A0A1B0GVQ3 168 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 RBBP9O75884 186 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 CCL3L1P16619 93 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 HLA-DMAP28067 261 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 TRIQKQ629K1 86 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 TMEM200BQ69YZ2 307 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 PRR18Q8N4B5 295 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 BEST4Q8NFU0 473 aa11.13□□□□□ -0.63
PBRM1-219ENST00000462207 RIMS4Q9H426 269 aaPredicted RBP11.13□□□□□ -0.63
PBRM1-219ENST00000462207 PRRC2AP48634 2157 aaKnown RBP11.12□□□□□ -0.63
PBRM1-219ENST00000462207 MALRD1Q5VYJ5 2156 aa11.12□□□□□ -0.63
PBRM1-219ENST00000462207 CSMD1Q96PZ7 3565 aa11.12□□□□□ -0.63
PBRM1-219ENST00000462207 CCDC168Q8NDH2 2452 aa11.12□□□□□ -0.63
PBRM1-219ENST00000462207 C12orf77C9JDV5 145 aa11.12□□□□□ -0.63
PBRM1-219ENST00000462207 H7C1Q1 480 aa11.12□□□□□ -0.63
PBRM1-219ENST00000462207 SCTP09683 121 aa11.12□□□□□ -0.63
PBRM1-219ENST00000462207 CBX5P45973 191 aa11.12□□□□□ -0.63
PBRM1-219ENST00000462207 HLA-DRB3P79483 266 aa11.12□□□□□ -0.63
PBRM1-219ENST00000462207 OR1L1Q8NH94 360 aa11.12□□□□□ -0.63
PBRM1-219ENST00000462207 REG4Q9BYZ8 158 aa11.12□□□□□ -0.63
PBRM1-219ENST00000462207 RPUSD1Q9UJJ7 312 aaKnown RBP11.12□□□□□ -0.63
PBRM1-219ENST00000462207 DSCAML1Q8TD84 2053 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 NPY4RP50391 375 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 ERVFRD-1P60508 538 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 ACTBP60709 375 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 ACTG1P63261 375 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 HMGN3Q15651 99 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 FAM53AQ6NSI3 398 aaPredicted RBP11.11□□□□□ -0.63
PBRM1-219ENST00000462207 FAAP20Q6NZ36 180 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 MOB1BQ7L9L4 216 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 RFESDQ8TAC1 157 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 TAF9BQ9HBM6 251 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 ZNF286AQ9HBT8 521 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 OR6C3Q9NZP0 311 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 LOC105371242A0A075B767 164 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 TRGV10A0A0A0MS01 117 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 IGKV1-6A0A0C4DH72 117 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 hADV38S2A0JD32 116 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 A8MXK9 166 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 C15orf65H3BRN8 121 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 M0QYG6 137 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 CD3DP04234 171 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 NAT1P18440 290 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 OMGP23515 440 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 MEF2CQ06413 473 aaPredicted RBP11.11□□□□□ -0.63
PBRM1-219ENST00000462207 KLF9Q13886 244 aaPredicted RBP11.11□□□□□ -0.63
PBRM1-219ENST00000462207 HERPUD1Q15011 391 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 LTC4SQ16873 150 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 IGSF11Q5DX21 431 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 ZNF57Q68EA5 555 aaPredicted RBP11.11□□□□□ -0.63
PBRM1-219ENST00000462207 OR4D10Q8NGI6 311 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 ST6GAL2Q96JF0 529 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 GON7Q9BXV9 100 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 CALYQ9NYX4 217 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 ANXA10Q9UJ72 324 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 TBC1D24Q9ULP9 559 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 LINC00312Q9Y6C7 94 aa11.11□□□□□ -0.63
PBRM1-219ENST00000462207 ARHGAP32A7KAX9 2087 aa11.1□□□□□ -0.63
PBRM1-219ENST00000462207 FLNBO75369 2602 aaKnown RBP11.1□□□□□ -0.63
PBRM1-219ENST00000462207 TRBV23-1A0A0A0MS06 115 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms