RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 C2orf54Q08AI8 447 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 ST3GAL4Q11206 333 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 ATP6V1FQ16864 119 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 SDK2Q58EX2 2172 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 ZNF678Q5SXM1 525 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 FAM104BQ5XKR9 115 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 BBS7Q8IWZ6 715 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 RNF10Q8N5U6 811 aaKnown RBP1.7□□□□□ -2.14
RFC4-211ENST00000460408 CYB561A3Q8NBI2 242 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 ING5Q8WYH8 240 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 MRPL48Q96GC5 212 aaKnown RBP1.7□□□□□ -2.14
RFC4-211ENST00000460408 C20orf144Q9BQM9 153 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 MS4A8Q9BY19 250 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 SND1-IT1Q9HBX3 110 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 IL37Q9NZH6 218 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 TFR2Q9UP52 801 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 NSD1Q96L73 2696 aaPredicted RBP1.7□□□□□ -2.14
RFC4-211ENST00000460408 AKAP9Q99996 3911 aa1.7□□□□□ -2.14
RFC4-211ENST00000460408 BAZ2BQ9UIF8 2168 aaKnown RBP1.69□□□□□ -2.14
RFC4-211ENST00000460408 ABCA4P78363 2273 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 MGAM2Q2M2H8 2515 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 PRAMEF26H0Y7S4 382 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 MFNGO00587 321 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 LDOC1O95751 146 aaPredicted RBP1.69□□□□□ -2.14
RFC4-211ENST00000460408 GALR1P47211 349 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 RPL31P62899 125 aaKnown RBP1.69□□□□□ -2.14
RFC4-211ENST00000460408 GRB2P62993 217 aaKnown RBP1.69□□□□□ -2.14
RFC4-211ENST00000460408 BTN1A1Q13410 526 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 FBXL19-AS1Q494R0 122 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 HHATQ5VTY9 493 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 TMEM136Q6ZRR5 245 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 SETD3Q86TU7 594 aaPredicted RBP1.69□□□□□ -2.14
RFC4-211ENST00000460408 ARHGAP18Q8N392 663 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 LINC00469Q8N7U9 141 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 LINC00304Q8N9R0 145 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 SLC26A10Q8NG04 563 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 OR1P1Q8NH06 330 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 OR51A7Q8NH64 312 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 ZFAND1Q8TCF1 268 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 DNAJB3Q8WWF6 145 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 CENPNQ96H22 339 aaPredicted RBP1.69□□□□□ -2.14
RFC4-211ENST00000460408 Q96MT0 163 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 CATSPER2Q96P56 530 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 TSNAXQ99598 290 aaKnown RBP1.69□□□□□ -2.14
RFC4-211ENST00000460408 LHX5Q9H2C1 402 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 GAL3ST2Q9H3Q3 398 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 RWDD2AQ9UIY3 292 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 GINS2Q9Y248 185 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 MXRA5Q9NR99 2828 aa1.69□□□□□ -2.14
RFC4-211ENST00000460408 H0YC42 278 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 CLDN34H7C241 214 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 CCL16O15467 120 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 ALOX12BO75342 701 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 OR5AL1P0C617 328 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 STAG3L2P0CL84 134 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 ADORA1P30542 326 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 P2RY2P41231 377 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 TGM4P49221 684 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 TAS2R60P59551 318 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 MGAT3Q09327 533 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 IL15RAQ13261 267 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 HNRNPA1L2Q32P51 320 aaKnown RBP1.68□□□□□ -2.14
RFC4-211ENST00000460408 FAM27D1Q5T7N8 215 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 LINC00337Q8N6G1 96 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 C1orf64Q8NEQ6 169 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 OR52K1Q8NGK4 314 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 ZNF420Q8TAQ5 688 aaPredicted RBP1.68□□□□□ -2.14
RFC4-211ENST00000460408 HGDQ93099 445 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 C1orf50Q9BV19 199 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 MAP1LC3CQ9BXW4 147 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 IFNKQ9P0W0 207 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 RAB22AQ9UL26 194 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 HIVEP2P31629 2446 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 BSNQ9UPA5 3926 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 DLG5Q8TDM6 1919 aa1.68□□□□□ -2.14
RFC4-211ENST00000460408 DCHS2Q6V1P9 2916 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 EML5Q05BV3 1969 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 PCDH15Q96QU1 1955 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 ANKRD20A5PA0PJZ0 165 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 H7C2Y5 167 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 M0R1B8 84 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 UPK1AO00322 258 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 YKT6O15498 198 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 NDUFS5O43920 106 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 SHOX2O60902 331 aaPredicted RBP1.67□□□□□ -2.14
RFC4-211ENST00000460408 FSTL3O95633 263 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 IGKV1D-16P01601 117 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 IGHV1-46P01743 117 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 IGLV7-43P04211 117 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 COL8A2P25067 703 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 MPIP34949 423 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 MEF2CQ06413 473 aaPredicted RBP1.67□□□□□ -2.14
RFC4-211ENST00000460408 ADIGQ0VDE8 80 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 DYNC1I2Q13409 638 aaKnown RBP1.67□□□□□ -2.14
RFC4-211ENST00000460408 WDR43Q15061 677 aaKnown RBP eCLIP1.67□□□□□ -2.14
RFC4-211ENST00000460408 TOMM34Q15785 309 aaPredicted RBP1.67□□□□□ -2.14
RFC4-211ENST00000460408 NDUFAF6Q330K2 333 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 CDNFQ49AH0 187 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 TTC32Q5I0X7 151 aa1.67□□□□□ -2.14
RFC4-211ENST00000460408 DUPD1Q68J44 220 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms