RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 HSMCR30P0CW71 290 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 MGMTP16455 207 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 MNDAP41218 407 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 GP2P55259 537 aaKnown RBP18.48■□□□□ 0.55
PTPN4-208ENST00000460289 TPBGQ13641 420 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 TRAM1Q15629 374 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 HSD17B12Q53GQ0 312 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 RBM48Q5RL73 367 aaKnown RBP18.48■□□□□ 0.55
PTPN4-208ENST00000460289 TPTE2P1Q5T6R2 138 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 PRSS22Q9GZN4 317 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 CST11Q9H112 138 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 BANF2Q9H503 90 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 RAB26Q9ULW5 256 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 TRRAPQ9Y4A5 3859 aa18.48■□□□□ 0.55
PTPN4-208ENST00000460289 TRAV39A0A0B4J263 110 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 MT-ND4P03905 459 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 GLAP06280 429 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 SSTR5P35346 364 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 LTC4SQ16873 150 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 FAM27D1Q5T7N8 215 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 RAB12Q6IQ22 244 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 ZNF497Q6ZNH5 498 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 Q6ZTK2 550 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 LRRTM1Q86UE6 522 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 Q8N2B8 174 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 TMEM104Q8NE00 496 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 AKR1E2Q96JD6 320 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 CNBD2Q96M20 576 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 BLOC1S6Q9UL45 172 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 PSG11Q9UQ72 335 aa18.47■□□□□ 0.55
PTPN4-208ENST00000460289 AIPO00170 330 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 ORC5O43913 435 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 CA11O75493 328 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 UCHL1P09936 223 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 FUT3P21217 361 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 PSMA1P25786 263 aaKnown RBP18.46■□□□□ 0.55
PTPN4-208ENST00000460289 HERPUD1Q15011 391 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 UTF1Q5T230 341 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 C16orf82Q7Z2V1 217 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 OR52M1Q8NGK5 317 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 CCDC107Q8WV48 283 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 CAPSLQ8WWF8 208 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 ARL11Q969Q4 196 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 TMEM203Q969S6 136 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 RPEQ96AT9 228 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 ZNF702PQ9H963 129 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 RAB9BQ9NP90 201 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 ETAA1Q9NY74 926 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 PEX16Q9Y5Y5 336 aa18.46■□□□□ 0.55
PTPN4-208ENST00000460289 ATP6V1G2O95670 118 aa18.45■□□□□ 0.54
PTPN4-208ENST00000460289 MLLT11Q13015 90 aaPredicted RBP18.45■□□□□ 0.54
PTPN4-208ENST00000460289 C1orf100Q5SVJ3 147 aa18.45■□□□□ 0.54
PTPN4-208ENST00000460289 KLHDC1Q8N7A1 406 aa18.45■□□□□ 0.54
PTPN4-208ENST00000460289 LEAP2Q969E1 77 aa18.45■□□□□ 0.54
PTPN4-208ENST00000460289 Q96M66 194 aa18.45■□□□□ 0.54
PTPN4-208ENST00000460289 LIN7BQ9HAP6 207 aa18.45■□□□□ 0.54
PTPN4-208ENST00000460289 IGHV3-7P01780 117 aa18.44■□□□□ 0.54
PTPN4-208ENST00000460289 CPEP16870 476 aa18.44■□□□□ 0.54
PTPN4-208ENST00000460289 MADCAM1Q13477 382 aa18.44■□□□□ 0.54
PTPN4-208ENST00000460289 FAM46BQ96A09 425 aa18.44■□□□□ 0.54
PTPN4-208ENST00000460289 MGLLQ99685 303 aa18.44■□□□□ 0.54
PTPN4-208ENST00000460289 MMP27Q9H306 513 aa18.44■□□□□ 0.54
PTPN4-208ENST00000460289 TRAPPC2LQ9UL33 140 aa18.44■□□□□ 0.54
PTPN4-208ENST00000460289 C15orf65H3BRN8 121 aa18.43■□□□□ 0.54
PTPN4-208ENST00000460289 ARL6IP5O75915 188 aa18.43■□□□□ 0.54
PTPN4-208ENST00000460289 FAM106CPP0CH98 169 aa18.43■□□□□ 0.54
PTPN4-208ENST00000460289 VSIG10L2P0DP72 767 aa18.43■□□□□ 0.54
PTPN4-208ENST00000460289 CD24P25063 80 aa18.43■□□□□ 0.54
PTPN4-208ENST00000460289 VHLP40337 213 aa18.43■□□□□ 0.54
PTPN4-208ENST00000460289 BLCAPP62952 87 aa18.43■□□□□ 0.54
PTPN4-208ENST00000460289 ARSJQ5FYB0 599 aaPredicted RBP18.43■□□□□ 0.54
PTPN4-208ENST00000460289 C6orf183Q5T699 404 aa18.43■□□□□ 0.54
PTPN4-208ENST00000460289 SYT6Q5T7P8 510 aaPredicted RBP18.43■□□□□ 0.54
PTPN4-208ENST00000460289 OR10X1Q8NGY0 326 aa18.43■□□□□ 0.54
PTPN4-208ENST00000460289 TOMM40LQ969M1 308 aa18.43■□□□□ 0.54
PTPN4-208ENST00000460289 SERTAD4Q9NUC0 356 aa18.43■□□□□ 0.54
PTPN4-208ENST00000460289 SDCBPO00560 298 aaPredicted RBP18.42■□□□□ 0.54
PTPN4-208ENST00000460289 SPINT2O43291 252 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 PEX14O75381 377 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 MPIG6BO95866 241 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 CD37P11049 281 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 HTR2CP28335 458 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 MAP2K4P45985 399 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 GNG10P50151 68 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 HABP2Q14520 560 aaPredicted RBP18.42■□□□□ 0.54
PTPN4-208ENST00000460289 C2orf68Q2NKX9 166 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 TRAT1Q6PIZ9 186 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 TMEM91Q6ZNR0 172 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 GAPTQ8N292 157 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 KCNG3Q8TAE7 436 aa18.42■□□□□ 0.54
PTPN4-208ENST00000460289 PDCD6O75340 191 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 OR2F2O95006 317 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 VSIG8P0DPA2 414 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 RAB7AP51149 207 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 RPS25P62851 125 aaKnown RBP18.41■□□□□ 0.54
PTPN4-208ENST00000460289 TBCEQ15813 527 aaPredicted RBP18.41■□□□□ 0.54
PTPN4-208ENST00000460289 TMEM30BQ3MIR4 351 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 SIGIRRQ6IA17 410 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 THNSL2Q86YJ6 484 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 C8orf31Q8N9H6 132 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms