RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 IGKV1-39P01597 117 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 IGKV1D-39P04432 117 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 ISG15P05161 165 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 S100A1P23297 94 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 MPV17P39210 176 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 STC1P52823 247 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 OR4D2P58180 307 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 PMVKQ15126 192 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 SYT6Q5T7P8 510 aaPredicted RBP3.04□□□□□ -1.92
CCDC50-203ENST00000460064 OGFRL1Q5TC84 451 aaPredicted RBP3.04□□□□□ -1.92
CCDC50-203ENST00000460064 CD200R1LQ6Q8B3 271 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 MRPL52Q86TS9 123 aaKnown RBP3.04□□□□□ -1.92
CCDC50-203ENST00000460064 BBS7Q8IWZ6 715 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 OR1M1Q8NGA1 313 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 OR52N1Q8NH53 320 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 ORAOV1Q8WV07 137 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 SMIM8Q96KF7 97 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 METTL26Q96S19 204 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 SCRT1Q9BWW7 348 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 UGT2B28Q9BY64 529 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 MRPL20Q9BYC9 149 aaKnown RBP3.04□□□□□ -1.92
CCDC50-203ENST00000460064 ARL6Q9H0F7 186 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 PCBD2Q9H0N5 130 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.04□□□□□ -1.92
CCDC50-203ENST00000460064 CMTM6Q9NX76 183 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 PRO0628Q9UI54 55 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 RWDD2AQ9UIY3 292 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 ACOT9Q9Y305 439 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 ARL5AQ9Y689 179 aa3.04□□□□□ -1.92
CCDC50-203ENST00000460064 C9orf84Q5VXU9 1444 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 FLT4P35916 1363 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 TMEM72A0PK05 275 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 KPNA3O00505 521 aaPredicted RBP3.03□□□□□ -1.92
CCDC50-203ENST00000460064 IFNA16P05015 189 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 NBEAP1P0C6P0 100 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 KCNE1P15382 129 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 CD36P16671 472 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 RPS12P25398 132 aaKnown RBP3.03□□□□□ -1.92
CCDC50-203ENST00000460064 MPIP34949 423 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 MAGEA12P43365 314 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 KRTAP13-2Q52LG2 175 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 SPIN4Q56A73 249 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 MORN3Q6PF18 240 aaPredicted RBP3.03□□□□□ -1.92
CCDC50-203ENST00000460064 PHF13Q86YI8 300 aaPredicted RBP3.03□□□□□ -1.92
CCDC50-203ENST00000460064 ATPAF2Q8N5M1 289 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 C12orf29Q8N999 325 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 OR10X1Q8NGY0 326 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 ZNF420Q8TAQ5 688 aaPredicted RBP3.03□□□□□ -1.92
CCDC50-203ENST00000460064 DYDC1Q8WWB3 177 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 SMIM19Q96E16 107 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 KCTD7Q96MP8 289 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 DERL3Q96Q80 235 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 OR2M4Q96R27 311 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 NXF2Q9GZY0 626 aaKnown RBP3.03□□□□□ -1.92
CCDC50-203ENST00000460064 TLNRD1Q9H1K6 362 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 ACOT13Q9NPJ3 140 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 PARVAQ9NVD7 372 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 ARL2BPQ9Y2Y0 163 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 NDUFAF1Q9Y375 327 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 ADAMTSL3P82987 1691 aa3.03□□□□□ -1.92
CCDC50-203ENST00000460064 BAZ2AQ9UIF9 1905 aaKnown RBP3.03□□□□□ -1.92
CCDC50-203ENST00000460064 SETD1AO15047 1707 aaKnown RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 SMIM9A6NGZ8 99 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 DISC1C4P0D8 188 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 PSMD12O00232 456 aaPredicted RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 ZNF593O00488 134 aaPredicted RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 MFNGO00587 321 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 PFDN6O15212 129 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 TCAPO15273 167 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 DHRS3O75911 302 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 IGKV1D-16P01601 117 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 TYMSP04818 313 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 OR4Q2P0C623 313 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 HIST1H1EP10412 219 aaKnown RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 SLC2A1P11166 492 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 UCHL3P15374 230 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 CELP19835 753 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 PSMA1P25786 263 aaKnown RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 CRABP1P29762 137 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 GRPRP30550 384 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 CDK9P50750 372 aaKnown RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 CRYBA4P53673 196 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 AP2S1P53680 142 aaPredicted RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 SKP2Q13309 424 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 KRR1Q13601 381 aaKnown RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 TOMM34Q15785 309 aaPredicted RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 TBC1D28Q2M2D7 210 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 SP6Q3SY56 376 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 BRMS1LQ5PSV4 323 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 DHRS4L2Q6PKH6 230 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 CLVS1Q8IUQ0 354 aaPredicted RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 OR6V1Q8N148 313 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.02□□□□□ -1.93
CCDC50-203ENST00000460064 OR51D1Q8NGF3 324 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 OR6K3Q8NGY3 331 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 FAM45AQ8TCE6 357 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 RASSF5Q8WWW0 418 aa3.02□□□□□ -1.93
CCDC50-203ENST00000460064 RAB8BQ92930 207 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms