RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 AKAP9Q99996 3911 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 F2RL2O00254 374 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 TXNL1O43396 289 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 ARG1P05089 322 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 GSTP1P09211 210 aaKnown RBP8.74□□□□□ -1.01
UBR4-208ENST00000459947 HTR1DP28221 377 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 BRS3P32247 399 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 UBA52P62987 128 aaKnown RBP8.74□□□□□ -1.01
UBR4-208ENST00000459947 SRSF7Q16629 238 aaKnown RBP eCLIP8.74□□□□□ -1.01
UBR4-208ENST00000459947 PNLIPRP3Q17RR3 467 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 TCF23Q7RTU1 214 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 GHITMQ9H3K2 345 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 LIN7BQ9HAP6 207 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 C12orf4Q9NQ89 552 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 ZNRD1Q9P1U0 126 aa8.74□□□□□ -1.01
UBR4-208ENST00000459947 IGHV2-26A0A0B4J1V2 119 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 MEIOCA2RUB1 952 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 SMIM18P0DKX4 95 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 COX7A1P24310 79 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 SDC2P34741 201 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 SAA4P35542 130 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 RPL5P46777 297 aaKnown RBP8.73□□□□□ -1.01
UBR4-208ENST00000459947 ALDH3B2P48448 385 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 DEFB112Q30KQ8 113 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 MZT2AQ6P582 158 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 OR10R2Q8NGX6 335 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 RAB3CQ96E17 227 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 DIABLOQ9NR28 239 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 MBNL3Q9NUK0 354 aaKnown RBP8.73□□□□□ -1.01
UBR4-208ENST00000459947 JPT1Q9UK76 154 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 A0A1W2PP11 408 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 CRYBA1P05813 215 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 KIR2DS4P43632 304 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 SERPINB10P48595 397 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 KIR2DS1Q14954 304 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 ABHD12Q8N2K0 398 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 C11orf42Q8N5U0 333 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 OR13A1Q8NGR1 328 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 ARL11Q969Q4 196 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 DPM3Q9P2X0 92 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 HSPB6O14558 160 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 MNDAP41218 407 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 HTD2P86397 168 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 HCP5Q6MZN7 132 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 C16orf82Q7Z2V1 217 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 NDNFQ8TB73 568 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 MRGPRDQ8TDS7 321 aa8.73□□□□□ -1.01
UBR4-208ENST00000459947 CMSS1Q9BQ75 279 aaKnown RBP8.73□□□□□ -1.01
UBR4-208ENST00000459947 RNF212BA8MTL3 300 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 ITGB1BP1O14713 200 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 GABARAPO95166 117 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 MELTFP08582 738 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 RAB7AP51149 207 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 C17orf58Q2M2W7 97 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 PRAMEF5Q5TYX0 476 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 DYRK2Q92630 601 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 FUNDC2Q9BWH2 189 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 PECRQ9BY49 303 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 GFOD1Q9NXC2 390 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 RABL2AQ9UBK7 228 aaPredicted RBP8.72□□□□□ -1.01
UBR4-208ENST00000459947 SPATA2Q9UM82 520 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 RABL2BQ9UNT1 228 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 NAV3Q8IVL0 2385 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 DSCAML1Q8TD84 2053 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 TALDO1P37837 337 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 VEGFCP49767 419 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 ZNF880Q6PDB4 577 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 BRD3OSQ6XYD6 125 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 PRIMA1Q86XR5 153 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 KIRREL1Q96J84 757 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 DAPK2Q9UIK4 370 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 FN1P02751 2386 aaKnown RBP8.72□□□□□ -1.01
UBR4-208ENST00000459947 IGHV3OR16-10A0A075B7F0 116 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 DNAJC9-AS1A6NH13 148 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 TPPPO94811 219 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 HMGN3Q15651 99 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 RUSC1-AS1Q66K80 236 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 SIGIRRQ6IA17 410 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 ZNF782Q6ZMW2 699 aaPredicted RBP8.72□□□□□ -1.01
UBR4-208ENST00000459947 OR8H3Q8N146 312 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 TPRX1Q8N7U7 411 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 MRPL30Q8TCC3 161 aaKnown RBP8.72□□□□□ -1.01
UBR4-208ENST00000459947 RAB2BQ8WUD1 216 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 C15orf40Q8WUR7 153 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 MMP28Q9H239 520 aa8.72□□□□□ -1.01
UBR4-208ENST00000459947 WNK2Q9Y3S1 2297 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 A0A0U1RQK1 487 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 UBE2QL1A1L167 161 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 FOXI3A8MTJ6 420 aaPredicted RBP8.71□□□□□ -1.01
UBR4-208ENST00000459947 NAPSAO96009 420 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 HIST1H1DP16402 221 aaKnown RBP8.71□□□□□ -1.01
UBR4-208ENST00000459947 DTYMKP23919 212 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 CBX5P45973 191 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 OR10A3P58181 314 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 KLRD1Q13241 179 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 HLA-DRB5Q30154 266 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 C11orf88Q6PI97 169 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 GALMQ96C23 342 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 ATG5Q9H1Y0 275 aa8.71□□□□□ -1.01
UBR4-208ENST00000459947 RANBP3Q9H6Z4 567 aaPredicted RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms