RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 HLA-DRB5Q30154 266 aa15.07■□□□□ 0
USP39-209ENST00000458268 LYPD6Q86Y78 171 aa15.07■□□□□ 0
USP39-209ENST00000458268 OR9G1Q8NH87 305 aa15.07■□□□□ 0
USP39-209ENST00000458268 PIFOQ8TCI5 191 aa15.07■□□□□ 0
USP39-209ENST00000458268 SDCBPO00560 298 aaPredicted RBP15.06■□□□□ 0
USP39-209ENST00000458268 DENRO43583 198 aaKnown RBP15.06■□□□□ 0
USP39-209ENST00000458268 VSIG8P0DPA2 414 aa15.06■□□□□ 0
USP39-209ENST00000458268 FUT3P21217 361 aa15.06■□□□□ 0
USP39-209ENST00000458268 CEACAM3P40198 252 aa15.06■□□□□ 0
USP39-209ENST00000458268 ARHGDIBP52566 201 aa15.06■□□□□ 0
USP39-209ENST00000458268 CLDN12P56749 244 aa15.06■□□□□ 0
USP39-209ENST00000458268 SSX1Q16384 188 aa15.06■□□□□ 0
USP39-209ENST00000458268 C1orf100Q5SVJ3 147 aa15.06■□□□□ 0
USP39-209ENST00000458268 SYT6Q5T7P8 510 aaPredicted RBP15.06■□□□□ 0
USP39-209ENST00000458268 ZNF497Q6ZNH5 498 aa15.06■□□□□ 0
USP39-209ENST00000458268 OR6M1Q8NGM8 313 aa15.06■□□□□ 0
USP39-209ENST00000458268 TOMM40LQ969M1 308 aa15.06■□□□□ 0
USP39-209ENST00000458268 NEDD4LQ96PU5 975 aa15.06■□□□□ 0
USP39-209ENST00000458268 NICN1Q9BSH3 213 aa15.06■□□□□ 0
USP39-209ENST00000458268 NPFFR1Q9GZQ6 430 aa15.06■□□□□ 0
USP39-209ENST00000458268 RCC2Q9P258 522 aaKnown RBP15.06■□□□□ 0
USP39-209ENST00000458268 GHRLQ9UBU3 117 aa15.06■□□□□ 0
USP39-209ENST00000458268 PITPNC1Q9UKF7 332 aa15.06■□□□□ 0
USP39-209ENST00000458268 PSG11Q9UQ72 335 aa15.06■□□□□ 0
USP39-209ENST00000458268 BUB1B-PAK6H3BSN5 160 aa15.05■□□□□ -0
USP39-209ENST00000458268 PDCD6O75340 191 aa15.05■□□□□ -0
USP39-209ENST00000458268 MT-ND4P03905 459 aa15.05■□□□□ -0
USP39-209ENST00000458268 CGB3P0DN86 165 aa15.05■□□□□ -0
USP39-209ENST00000458268 CGB7P0DN87 165 aa15.05■□□□□ -0
USP39-209ENST00000458268 CD34P28906 385 aa15.05■□□□□ -0
USP39-209ENST00000458268 RAB11BQ15907 218 aa15.05■□□□□ -0
USP39-209ENST00000458268 TPTE2P1Q5T6R2 138 aa15.05■□□□□ -0
USP39-209ENST00000458268 HES5Q5TA89 166 aa15.05■□□□□ -0
USP39-209ENST00000458268 FAM53AQ6NSI3 398 aaPredicted RBP15.05■□□□□ -0
USP39-209ENST00000458268 CCBE1Q6UXH8 406 aaPredicted RBP15.05■□□□□ -0
USP39-209ENST00000458268 OR10X1Q8NGY0 326 aa15.05■□□□□ -0
USP39-209ENST00000458268 OR2T6Q8NHC8 308 aa15.05■□□□□ -0
USP39-209ENST00000458268 KCNG3Q8TAE7 436 aa15.05■□□□□ -0
USP39-209ENST00000458268 CAPSLQ8WWF8 208 aa15.05■□□□□ -0
USP39-209ENST00000458268 RPEQ96AT9 228 aa15.05■□□□□ -0
USP39-209ENST00000458268 GFI1Q99684 422 aa15.05■□□□□ -0
USP39-209ENST00000458268 MMP28Q9H239 520 aa15.05■□□□□ -0
USP39-209ENST00000458268 NCOR1P1Q9H4R4 102 aa15.05■□□□□ -0
USP39-209ENST00000458268 AMMECR1Q9Y4X0 333 aaPredicted RBP15.05■□□□□ -0
USP39-209ENST00000458268 A6NDX4 124 aa15.04■□□□□ -0
USP39-209ENST00000458268 VGLL3A8MV65 326 aa15.04■□□□□ -0
USP39-209ENST00000458268 J3QR06 171 aa15.04■□□□□ -0
USP39-209ENST00000458268 IGLV1-47P01700 117 aa15.04■□□□□ -0
USP39-209ENST00000458268 GZMHP20718 246 aa15.04■□□□□ -0
USP39-209ENST00000458268 BRS3P32247 399 aa15.04■□□□□ -0
USP39-209ENST00000458268 KRTAP10-3P60369 221 aa15.04■□□□□ -0
USP39-209ENST00000458268 RPS27AP62979 156 aaKnown RBP15.04■□□□□ -0
USP39-209ENST00000458268 HABP2Q14520 560 aaPredicted RBP15.04■□□□□ -0
USP39-209ENST00000458268 HIST2H2BDQ6DRA6 164 aa15.04■□□□□ -0
USP39-209ENST00000458268 SIGIRRQ6IA17 410 aa15.04■□□□□ -0
USP39-209ENST00000458268 LIAT1Q6ZQX7 453 aa15.04■□□□□ -0
USP39-209ENST00000458268 SPARTQ8N0X7 666 aa15.04■□□□□ -0
USP39-209ENST00000458268 OR10V1Q8NGI7 309 aa15.04■□□□□ -0
USP39-209ENST00000458268 SGMS2Q8NHU3 365 aa15.04■□□□□ -0
USP39-209ENST00000458268 SETD6Q8TBK2 473 aa15.04■□□□□ -0
USP39-209ENST00000458268 C16orf95Q9H693 158 aa15.04■□□□□ -0
USP39-209ENST00000458268 CHMP1AQ9HD42 196 aaPredicted RBP15.04■□□□□ -0
USP39-209ENST00000458268 GNG12Q9UBI6 72 aa15.04■□□□□ -0
USP39-209ENST00000458268 SMIM30A4D0T7 59 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A10PA6NDY2 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A18PA6NE21 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A16PA6NEW6 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A20PA6NIJ5 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A7PA6NKC0 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A22PA8MWA6 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A12PA8MX19 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A5PA8MXJ8 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A23PA8MXZ1 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 SLC22A1O15245 554 aa15.03■□□□□ -0
USP39-209ENST00000458268 SPINT2O43291 252 aa15.03■□□□□ -0
USP39-209ENST00000458268 TSPAN9O75954 239 aa15.03■□□□□ -0
USP39-209ENST00000458268 BPNT1O95861 308 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A15PP0C7V4 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A13PP0C7W8 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A14PP0C7W9 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 FAM90A24PP0C7X0 464 aa15.03■□□□□ -0
USP39-209ENST00000458268 VSIG10L2P0DP72 767 aa15.03■□□□□ -0
USP39-209ENST00000458268 ARSBP15848 533 aa15.03■□□□□ -0
USP39-209ENST00000458268 RCC1P18754 421 aaPredicted RBP15.03■□□□□ -0
USP39-209ENST00000458268 MYL9P24844 172 aa15.03■□□□□ -0
USP39-209ENST00000458268 MNDAP41218 407 aa15.03■□□□□ -0
USP39-209ENST00000458268 UNC119Q13432 240 aa15.03■□□□□ -0
USP39-209ENST00000458268 C6orf183Q5T699 404 aa15.03■□□□□ -0
USP39-209ENST00000458268 C6orf201Q7Z4U5 140 aa15.03■□□□□ -0
USP39-209ENST00000458268 C11orf44Q8N8P7 122 aa15.03■□□□□ -0
USP39-209ENST00000458268 OR51D1Q8NGF3 324 aa15.03■□□□□ -0
USP39-209ENST00000458268 OR1L1Q8NH94 360 aa15.03■□□□□ -0
USP39-209ENST00000458268 CREB3L1Q96BA8 519 aa15.03■□□□□ -0
USP39-209ENST00000458268 NDUFB11Q9NX14 153 aa15.03■□□□□ -0
USP39-209ENST00000458268 A0A087X0M5 115 aa15.02■□□□□ -0
USP39-209ENST00000458268 A0A1B0GX30 115 aa15.02■□□□□ -0
USP39-209ENST00000458268 C12orf77C9JDV5 145 aa15.02■□□□□ -0
USP39-209ENST00000458268 NPIPB11E5RHQ5 1161 aa15.02■□□□□ -0
USP39-209ENST00000458268 H3BUI4 141 aa15.02■□□□□ -0
USP39-209ENST00000458268 CCRL2O00421 344 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms