RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 MGST3O14880 152 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 PHF1O43189 567 aaPredicted RBP9.08□□□□□ -0.96
SCN9A-205ENST00000454569 CD3DP04234 171 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 CSF1P09603 554 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 SCTP09683 121 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 GSTT2P0CG29 244 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 NDUFB7P17568 137 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 NAT1P18440 290 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 EDDM3BP56851 147 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 LMO4P61968 165 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 SSBP1Q04837 148 aaKnown RBP9.08□□□□□ -0.96
SCN9A-205ENST00000454569 DYRK1AQ13627 763 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 RBM39Q14498 530 aaKnown RBP9.08□□□□□ -0.96
SCN9A-205ENST00000454569 ITPR3Q14573 2671 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 TMEM155Q4W5P6 130 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 SLC35E4Q6ICL7 350 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 PEG10Q86TG7 708 aaKnown RBP9.08□□□□□ -0.96
SCN9A-205ENST00000454569 GLCCI1Q86VQ1 547 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 CLDND2Q8NHS1 167 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 FAM168AQ92567 244 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 TINAGL1Q9GZM7 467 aaPredicted RBP9.08□□□□□ -0.96
SCN9A-205ENST00000454569 DNTTIP1Q9H147 329 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 PATZ1Q9HBE1 687 aaKnown RBP9.08□□□□□ -0.96
SCN9A-205ENST00000454569 CHMP1AQ9HD42 196 aaPredicted RBP9.08□□□□□ -0.96
SCN9A-205ENST00000454569 TAS2R8Q9NYW2 309 aa9.08□□□□□ -0.96
SCN9A-205ENST00000454569 SLC25A10Q9UBX3 287 aaPredicted RBP9.08□□□□□ -0.96
SCN9A-205ENST00000454569 MEIKINA0A087WXM9 373 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 TRBV6-6A0A0A6YYG2 114 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 IGHV4-61A0A0C4DH41 118 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 NKX6-3A6NJ46 265 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 F5H0A9 414 aaPredicted RBP9.07□□□□□ -0.96
SCN9A-205ENST00000454569 PMP2P02689 132 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 CSN2P05814 226 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 RPS2P15880 293 aaKnown RBP9.07□□□□□ -0.96
SCN9A-205ENST00000454569 DNASE1P24855 282 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 ZFP36P26651 326 aaKnown RBP9.07□□□□□ -0.96
SCN9A-205ENST00000454569 BTCP35070 178 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 ZNF273Q14593 569 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 HERPUD1Q15011 391 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 IGSF11Q5DX21 431 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 SLC36A1Q7Z2H8 476 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 BEST4Q8NFU0 473 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 MRGPRDQ8TDS7 321 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 TIMD4Q96H15 378 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 MED30Q96HR3 178 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 EAF1Q96JC9 268 aaPredicted RBP9.07□□□□□ -0.96
SCN9A-205ENST00000454569 C12orf4Q9NQ89 552 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 TMEM30CPA0ZSE6 113 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 ODAMA1E959 279 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 NAP1L6A6NFF2 107 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 SDCBPO00560 298 aaPredicted RBP9.07□□□□□ -0.96
SCN9A-205ENST00000454569 NDUFB3O43676 98 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 NDUFA2O43678 99 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 IGHV2-5P01817 119 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 ZNF735P0CB33 412 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 CGB3P0DN86 165 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 CGB7P0DN87 165 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 DTYMKP23919 212 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 FAUP35544 74 aaKnown RBP9.07□□□□□ -0.96
SCN9A-205ENST00000454569 P2RX3P56373 397 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 ARL6IP1Q15041 203 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 CLEC12BQ2HXU8 276 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 WDR25Q64LD2 544 aaPredicted RBP9.07□□□□□ -0.96
SCN9A-205ENST00000454569 PLET1Q6UQ28 207 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 OR4C16Q8NGL9 310 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 OR1L1Q8NH94 360 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 RFESDQ8TAC1 157 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 DEDD2Q8WXF8 326 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 FAM234AQ9H0X4 552 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 MMP28Q9H239 520 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 DPAGT1Q9H3H5 408 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 HRASLSQ9HDD0 168 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 IFT46Q9NQC8 304 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 MBNL3Q9NUK0 354 aaKnown RBP9.07□□□□□ -0.96
SCN9A-205ENST00000454569 BEX4Q9NWD9 120 aaPredicted RBP9.07□□□□□ -0.96
SCN9A-205ENST00000454569 TRAPPC2LQ9UL33 140 aa9.07□□□□□ -0.96
SCN9A-205ENST00000454569 FLNBO75369 2602 aaKnown RBP9.06□□□□□ -0.96
SCN9A-205ENST00000454569 A0A096LNT2 108 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 KIAA1324LA8MWY0 1029 aaPredicted RBP9.06□□□□□ -0.96
SCN9A-205ENST00000454569 C22orf46C9J442 243 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 FAM157AC9JC47 383 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 C12orf77C9JDV5 145 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 C15orf65H3BRN8 121 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 MMP23AO75900 390 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 CD74P04233 296 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 CCL3L1P16619 93 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 ERP29P30040 261 aaKnown RBP9.06□□□□□ -0.96
SCN9A-205ENST00000454569 SLC6A1P30531 599 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 RCVRNP35243 200 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 SSTR5P35346 364 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 HRH1P35367 487 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 BCAP31P51572 246 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 DLX1P56177 255 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 TAS2R19P59542 299 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 PAX5Q02548 391 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 C17orf58Q2M2W7 97 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 TMEM200BQ69YZ2 307 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 CLEC2AQ6UVW9 174 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 BTN2A1Q7KYR7 527 aa9.06□□□□□ -0.96
SCN9A-205ENST00000454569 MUC20Q8N307 709 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms