RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 BGLAPP02818 100 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 SP1P08047 785 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 FGF2P09038 288 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 PGCP20142 388 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 FKBP2P26885 142 aaKnown RBP6.63□□□□□ -1.35
BRCC3-208ENST00000453705 P2RX1P51575 399 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 TAS2R31P59538 309 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 BTG1P62324 171 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 TRIP6Q15654 476 aaKnown RBP6.63□□□□□ -1.35
BRCC3-208ENST00000453705 ZNF322Q6U7Q0 402 aaPredicted RBP6.63□□□□□ -1.35
BRCC3-208ENST00000453705 HSD17B13Q7Z5P4 300 aaPredicted RBP6.63□□□□□ -1.35
BRCC3-208ENST00000453705 EID2Q8N6I1 236 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 ZNF676Q8N7Q3 588 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 APCDD1LQ8NCL9 501 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 DMBX1Q8NFW5 382 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 OR11H4Q8NGC9 324 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 OR4C3Q8NH37 302 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 SIGMAR1Q99720 223 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 SLC6A7Q99884 636 aa6.63□□□□□ -1.35
BRCC3-208ENST00000453705 RP1P56715 2156 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 GJE1A6NN92 205 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 M0R129 80 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 ARSBP15848 533 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 ABOP16442 354 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 ZNF17P17021 662 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 RNASE10Q5GAN6 216 aaKnown RBP6.62□□□□□ -1.35
BRCC3-208ENST00000453705 NHLRC3Q5JS37 347 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 DMKNQ6E0U4 476 aaPredicted RBP6.62□□□□□ -1.35
BRCC3-208ENST00000453705 MOB3BQ86TA1 216 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 SKA3Q8IX90 412 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 SLC35F2Q8IXU6 374 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 ACBD7Q8N6N7 88 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 GPR148Q8TDV2 347 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 Q8WTZ3 238 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 SFT2D1Q8WV19 159 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.62□□□□□ -1.35
BRCC3-208ENST00000453705 ADGRL4Q9HBW9 690 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 RBFOX1Q9NWB1 397 aaKnown RBP6.62□□□□□ -1.35
BRCC3-208ENST00000453705 MPDZO75970 2070 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 TRAV36DV7A0A075B6V5 113 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 FAM157AC9JC47 383 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 SIRPB1O00241 398 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 SH2D1BO14796 132 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 FABP7O15540 132 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 ORC5O43913 435 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 STK17BO94768 372 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 CSF3P09919 207 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 OR1D4P47884 311 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 PPOXP50336 477 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 POLR2HP52434 150 aaKnown RBP6.62□□□□□ -1.35
BRCC3-208ENST00000453705 HOXC5Q00444 222 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 KLF5Q13887 457 aaPredicted RBP6.62□□□□□ -1.35
BRCC3-208ENST00000453705 CD226Q15762 336 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 C9orf139Q6ZV77 190 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 OAFQ86UD1 273 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 OR2M7Q8NG81 312 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 OR2T27Q8NH04 317 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 SLC25A46Q96AG3 418 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 NARS2Q96I59 477 aaKnown RBP6.62□□□□□ -1.35
BRCC3-208ENST00000453705 ZNF436Q9C0F3 470 aaPredicted RBP6.62□□□□□ -1.35
BRCC3-208ENST00000453705 OR51E2Q9H255 320 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 SSR3Q9UNL2 185 aa6.62□□□□□ -1.35
BRCC3-208ENST00000453705 SPTBN2O15020 2390 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 ZC3H12DA2A288 527 aaKnown RBP6.61□□□□□ -1.35
BRCC3-208ENST00000453705 GNG7O60262 68 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 MPC2O95563 127 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 CD14P08571 375 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 SPI1P17947 270 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 PVALBP20472 110 aaPredicted RBP6.61□□□□□ -1.35
BRCC3-208ENST00000453705 CFPP27918 469 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 CD96P40200 585 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 CX3CR1P49238 355 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 ZNF117Q03924 483 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 MYBPHQ13203 477 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 RSU1Q15404 277 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 CR1LQ2VPA4 569 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 ZNF585BQ52M93 769 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 ZNF684Q5T5D7 378 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 VASNQ6EMK4 673 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 APOOLQ6UXV4 268 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 WDR31Q8NA23 367 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 GPR119Q8TDV5 335 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 SEH1LQ96EE3 360 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 TXNL4BQ9NX01 149 aaKnown RBP6.61□□□□□ -1.35
BRCC3-208ENST00000453705 RASL12Q9NYN1 266 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 OR5H14A6NHG9 310 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 AIPO00170 330 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 SCRG1O75711 98 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 HLA-DPB1P04440 258 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 GABRA1P14867 456 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 HOXB4P17483 251 aaPredicted RBP6.61□□□□□ -1.35
BRCC3-208ENST00000453705 RPL35AP18077 110 aaKnown RBP6.61□□□□□ -1.35
BRCC3-208ENST00000453705 PAX6P26367 422 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 APOBEC1P41238 236 aaKnown RBP6.61□□□□□ -1.35
BRCC3-208ENST00000453705 MAP2K3P46734 347 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 ZNF133P52736 654 aaPredicted RBP6.61□□□□□ -1.35
BRCC3-208ENST00000453705 PLCXD2Q0VAA5 305 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 NSDHLQ15738 373 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 NKPD1Q17RQ9 610 aa6.61□□□□□ -1.35
BRCC3-208ENST00000453705 RNF212Q495C1 297 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms