RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 SLC2A2P11168 524 aaPredicted RBP7.15□□□□□ -1.26
COL28A1-205ENST00000453441 SRD5A1P18405 259 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 FPR2P25090 351 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 SOX6P35712 828 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 DLX6P56179 175 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 ARF6P62330 175 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 MRPS15P82914 257 aaKnown RBP7.15□□□□□ -1.26
COL28A1-205ENST00000453441 AESQ08117 197 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 ZNF273Q14593 569 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 SIGIRRQ6IA17 410 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 OR10K2Q6IF99 312 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 MZT2AQ6P582 158 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 Q6ZTK2 550 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 C9orf139Q6ZV77 190 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 LURAP1LQ8IV03 231 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 FGFRL1Q8N441 504 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 MFSD4AQ8N468 514 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 OR4M1Q8NGD0 313 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 OR10R2Q8NGX6 335 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 LGALS14Q8TCE9 139 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 RAB3CQ96E17 227 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 PCGF1Q9BSM1 259 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 LINC00574Q9H8X3 128 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.15□□□□□ -1.26
COL28A1-205ENST00000453441 RHBDL2Q9NX52 303 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 NUP50Q9UKX7 468 aa7.15□□□□□ -1.26
COL28A1-205ENST00000453441 KBTBD11-OT1A0A1B0GTJ5 212 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 SMIM30A4D0T7 59 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 HSPB6O14558 160 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 MT-ND4P03905 459 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 CLEC2LP0C7M8 214 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 ZNF182P17025 639 aaPredicted RBP7.14□□□□□ -1.27
COL28A1-205ENST00000453441 GLIPR1P48060 266 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 VEGFCP49767 419 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 UBE2E1P51965 193 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 PITPNAQ00169 270 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 KIAA2026Q5HYC2 2103 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 UBE2NLQ5JXB2 153 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 HEPN1Q6WQI6 88 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 TCF23Q7RTU1 214 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 VMO1Q7Z5L0 202 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 RTN4RL2Q86UN3 420 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 BPIFB2Q8N4F0 458 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 OR52M1Q8NGK5 317 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 OR13D1Q8NGV5 346 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 PLPPR1Q8TBJ4 325 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 ISOC1Q96CN7 298 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 TBX15Q96SF7 602 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 NICN1Q9BSH3 213 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 NAA50Q9GZZ1 169 aaKnown RBP7.14□□□□□ -1.27
COL28A1-205ENST00000453441 ATG5Q9H1Y0 275 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 ABCG5Q9H222 651 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 C12orf4Q9NQ89 552 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 DIABLOQ9NR28 239 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 KCNIP1Q9NZI2 227 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 CCDC59Q9P031 241 aaKnown RBP7.14□□□□□ -1.27
COL28A1-205ENST00000453441 KIF25Q9UIL4 384 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 TRAPPC2LQ9UL33 140 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 SESN1Q9Y6P5 492 aa7.14□□□□□ -1.27
COL28A1-205ENST00000453441 A0A087X0M5 115 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 A0A0A6YYD4 124 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 A0A0A6YYJ9 748 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 TRAV40A0A0B4J280 105 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 IGHV1-69DA0A0B4J2H0 117 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 A0A1B0GX30 115 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 NPIPB11E5RHQ5 1161 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 RAB27BO00194 218 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 SOCS1O15524 211 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 SPINT2O43291 252 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 TPPPO94811 219 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 NAPSAO96009 420 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 IFNA2P01563 188 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 IGHV1-69P01742 117 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 APOA1P02647 267 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 CD3GP09693 182 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 CGB3P0DN86 165 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 CGB7P0DN87 165 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 IGHV1-8P0DP01 117 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 HIST1H1DP16402 221 aaKnown RBP7.13□□□□□ -1.27
COL28A1-205ENST00000453441 CCL3L1P16619 93 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 TGFBR1P36897 503 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 GLP1RP43220 463 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 SRSF7Q16629 238 aaKnown RBP eCLIP7.13□□□□□ -1.27
COL28A1-205ENST00000453441 PNLIPRP3Q17RR3 467 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 Q3ZCU0 254 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 MIDNQ504T8 468 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 Q71RC1 249 aaPredicted RBP7.13□□□□□ -1.27
COL28A1-205ENST00000453441 REC114Q7Z4M0 266 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 C6orf201Q7Z4U5 140 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 Q8N7P7 452 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 TPRX1Q8N7U7 411 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 TNFRSF14Q92956 283 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 CREB3L1Q96BA8 519 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 S100A16Q96FQ6 103 aaKnown RBP7.13□□□□□ -1.27
COL28A1-205ENST00000453441 ARHGAP5-AS1Q96IT6 56 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 SULT4A1Q9BR01 284 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 PECRQ9BY49 303 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 KCNK15Q9H427 330 aa7.13□□□□□ -1.27
COL28A1-205ENST00000453441 MBNL3Q9NUK0 354 aaKnown RBP7.13□□□□□ -1.27
COL28A1-205ENST00000453441 CALYQ9NYX4 217 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms