RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-209ENST00000451859 IL1AP01583 271 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 PRB2P02812 416 aaPredicted RBP6.93□□□□□ -1.3
RFX3-209ENST00000451859 MAS1P04201 325 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 ALDOBP05062 364 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 IGHV3-43DP0DP04 118 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 CELP19835 753 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 CD34P28906 385 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 CAPGP40121 348 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 RPS11P62280 158 aaKnown RBP eCLIP6.93□□□□□ -1.3
RFX3-209ENST00000451859 DIAPH2-AS1Q14236 149 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 HNF4GQ14541 408 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 Q499Y3 187 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 DMKNQ6E0U4 476 aaPredicted RBP6.93□□□□□ -1.3
RFX3-209ENST00000451859 AWAT2Q6E213 333 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 Q8N2B8 174 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 OR10X1Q8NGY0 326 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 AKR1E2Q96JD6 320 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 PGLYRP3Q96LB9 341 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 C8orf4Q9NR00 106 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 PSG11Q9UQ72 335 aa6.93□□□□□ -1.3
RFX3-209ENST00000451859 MRPS28Q9Y2Q9 187 aaKnown RBP6.93□□□□□ -1.3
RFX3-209ENST00000451859 AMMECR1Q9Y4X0 333 aaPredicted RBP6.93□□□□□ -1.3
RFX3-209ENST00000451859 DNAH3Q8TD57 4116 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 A0A087X0M5 115 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 TRBV5-5A0A0J9YX44 114 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 A0A1B0GX30 115 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 LY6LH3BQJ8 138 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 SDCBPO00560 298 aaPredicted RBP6.92□□□□□ -1.3
RFX3-209ENST00000451859 OR2F2O95006 317 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 OPN1MWP04001 364 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 SNRNP70P08621 437 aaKnown RBP6.92□□□□□ -1.3
RFX3-209ENST00000451859 OPN1MW2P0DN77 364 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 OPN1MW3P0DN78 364 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 CGB3P0DN86 165 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 CGB7P0DN87 165 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 IGFBP3P17936 291 aaPredicted RBP6.92□□□□□ -1.3
RFX3-209ENST00000451859 VHLP40337 213 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 REG1BP48304 166 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 KCNJ3P48549 501 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 MADCAM1Q13477 382 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 YIF1BQ5BJH7 314 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 LCE4AQ5TA78 99 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 OGFRL1Q5TC84 451 aaPredicted RBP6.92□□□□□ -1.3
RFX3-209ENST00000451859 LAIR2Q6ISS4 152 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 FAM53AQ6NSI3 398 aaPredicted RBP6.92□□□□□ -1.3
RFX3-209ENST00000451859 CCDC144NLQ6NUI1 221 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 C10orf99Q6UWK7 81 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 GLIPR1L1Q6UWM5 242 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 ASCL4Q6XD76 172 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 C16orf82Q7Z2V1 217 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 CENPVQ7Z7K6 275 aaPredicted RBP6.92□□□□□ -1.3
RFX3-209ENST00000451859 NDUFA11Q86Y39 141 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 PRR18Q8N4B5 295 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 DRAM1Q8N682 238 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 OR5AU1Q8NGC0 362 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 ARL11Q969Q4 196 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 CREB3L1Q96BA8 519 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 CYYR1Q96J86 154 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 RBM14Q96PK6 669 aaKnown RBP6.92□□□□□ -1.3
RFX3-209ENST00000451859 WNT10AQ9GZT5 417 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 MRPL18Q9H0U6 180 aaKnown RBP6.92□□□□□ -1.3
RFX3-209ENST00000451859 BANF2Q9H503 90 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 LIN7BQ9HAP6 207 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 PAK1IP1Q9NWT1 392 aaPredicted RBP6.92□□□□□ -1.3
RFX3-209ENST00000451859 IL36GQ9NZH8 169 aa6.92□□□□□ -1.3
RFX3-209ENST00000451859 TRBV5-7A0A0A0MS05 114 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 IGHV3-72A0A0B4J1Y9 119 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 A0A1W2PPI3 338 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 TCRBV4S1A1TA0A5B7 111 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 NPIPB11E5RHQ5 1161 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 AIPO00170 330 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 HSD17B6O14756 317 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 CRTAPO75718 401 aaPredicted RBP6.91□□□□□ -1.3
RFX3-209ENST00000451859 PF4V1P10720 104 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 GTF2F2P13984 249 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 TMEM11P17152 192 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 WNT4P56705 351 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 TAS2R43P59537 309 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 EMX1Q04741 257 aaPredicted RBP6.91□□□□□ -1.3
RFX3-209ENST00000451859 INSL4Q14641 139 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 MPV17LQ2QL34 196 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 MOB3BQ86TA1 216 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 ZNF485Q8NCK3 441 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 Q8NFD4 153 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 OR4F17Q8NGA8 305 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 OR4K15Q8NH41 348 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 WIPF2Q8TF74 440 aaPredicted RBP6.91□□□□□ -1.3
RFX3-209ENST00000451859 FAM46BQ96A09 425 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 RBMXL1Q96E39 390 aaKnown RBP6.91□□□□□ -1.3
RFX3-209ENST00000451859 DERL3Q96Q80 235 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 OR4F4Q96R69 305 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 SELENOIQ9C0D9 397 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 VCXQ9H320 206 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 CNOT2Q9NZN8 540 aaKnown RBP6.91□□□□□ -1.3
RFX3-209ENST00000451859 PSORS1C1Q9UIG5 152 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 TRAPPC2LQ9UL33 140 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 MOB4Q9Y3A3 225 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 HSPE1-MOB4S4R3N1 261 aa6.91□□□□□ -1.3
RFX3-209ENST00000451859 UBE2QL1A1L167 161 aa6.9□□□□□ -1.3
RFX3-209ENST00000451859 OOSP1A8MZH6 123 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms