RNA–Protein interactions for RNA: ENST00000451716.5

COL27A1-202, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 2,865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-202ENST00000451716 ZFP62Q8NB50 900 aaPredicted RBP10.36□□□□□ -0.75
COL27A1-202ENST00000451716 POC1AQ8NBT0 407 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 DEFB124Q8NES8 71 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 OR11L1Q8NGX0 322 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 MRPL24Q96A35 216 aaKnown RBP10.36□□□□□ -0.75
COL27A1-202ENST00000451716 PIK3IP1Q96FE7 263 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 C2orf50Q96LR7 162 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF488Q96MN9 340 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 OR2S2Q9NQN1 319 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 FAM86C1Q9NVL1 165 aa10.36□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF724A8MTY0 619 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 TCF21O43680 179 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 IL18BPO95998 194 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 CTSDP07339 412 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF728P0DKX0 622 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 DTYMKP23919 212 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 NOVA1P51513 510 aaKnown RBP10.35□□□□□ -0.75
COL27A1-202ENST00000451716 ESPL1Q14674 2120 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 SMIM15Q7Z3B0 74 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 POM121L2Q96KW2 1035 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 TLNRD1Q9H1K6 362 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 BARX1Q9HBU1 254 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-202ENST00000451716 GAR1Q9NY12 217 aaKnown RBP10.35□□□□□ -0.75
COL27A1-202ENST00000451716 ZDHHC8Q9ULC8 765 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 TRBV6-7A0A0A0MS04 114 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 CBY3A6NI87 242 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 CRYM-AS1A6NIL9 109 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 A6NNC1 897 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 SYNGR1O43759 233 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 FUT3P21217 361 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 GCNT2Q8N0V5 402 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 OR5L1Q8NGL2 311 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 OR10D4PQ8NGN7 298 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 TMED6Q8WW62 240 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 APOBEC3DQ96AK3 386 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-202ENST00000451716 WDYHV1Q96HA8 205 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 GSX1Q9H4S2 264 aaPredicted RBP10.35□□□□□ -0.75
COL27A1-202ENST00000451716 IL36GQ9NZH8 169 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 MTCH1Q9NZJ7 389 aa10.35□□□□□ -0.75
COL27A1-202ENST00000451716 DMXL2Q8TDJ6 3036 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 TRGV5A0A0B4J1U4 118 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 IGHV3-64DA0A0J9YX35 117 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 IFITM10A6NMD0 228 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 A8MWP6 167 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 MKRN2OSH3BPM6 223 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 SCGB1D2O95969 90 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 OR5AC1P0C628 307 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 PAX1P15863 534 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 RCC1P18754 421 aaPredicted RBP10.34□□□□□ -0.75
COL27A1-202ENST00000451716 CCL11P51671 97 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 OR2B8PP59922 312 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 RNPS1Q15287 305 aaKnown RBP10.34□□□□□ -0.75
COL27A1-202ENST00000451716 ABCA11PQ4W5N1 156 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 PRSS54Q6PEW0 395 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 DHRS11Q6UWP2 260 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 ZDHHC23Q8IYP9 409 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 RTN4IP1Q8WWV3 396 aaPredicted RBP10.34□□□□□ -0.75
COL27A1-202ENST00000451716 HIST1H2BAQ96A08 127 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 GPHA2Q96T91 129 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 SNHG12Q9BXW3 62 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 CYTL1Q9NRR1 136 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 C1orf123Q9NWV4 160 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 SLC22A20A6NK97 555 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 CD300LBA8K4G0 201 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 OPN1MWP04001 364 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 OPN1MW2P0DN77 364 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 OPN1MW3P0DN78 364 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 PLP2Q04941 152 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 RNF151Q2KHN1 245 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 GGNBP1Q5YKI7 109 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF585AQ6P3V2 769 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 TMEM108Q6UXF1 575 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 MYPOPQ86VE0 399 aaPredicted RBP10.34□□□□□ -0.75
COL27A1-202ENST00000451716 EXTL1Q92935 676 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 IP6K3Q96PC2 410 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 EGLN1Q9GZT9 426 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 ZNF286AQ9HBT8 521 aa10.34□□□□□ -0.75
COL27A1-202ENST00000451716 CYB5R3P00387 301 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-202ENST00000451716 CEACAM8P31997 349 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-202ENST00000451716 IL15RAQ13261 267 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 CEACAM21Q3KPI0 293 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 ARSJQ5FYB0 599 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-202ENST00000451716 OR2T2Q6IF00 324 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 OR2A2Q6IF42 318 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 DECR2Q9NUI1 292 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 ASF1BQ9NVP2 202 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 CELA3BP08861 270 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 AADACP22760 399 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 ARR3P36575 388 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 LYZL2Q7Z4W2 148 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 MDP1Q86V88 176 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 C17orf78Q8N4C9 275 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 OR1S2Q8NGQ3 325 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 SLC2A9Q9NRM0 540 aa10.33□□□□□ -0.76
COL27A1-202ENST00000451716 LSM5Q9Y4Y9 91 aaKnown RBP10.33□□□□□ -0.76
COL27A1-202ENST00000451716 RP1L1Q8IWN7 2480 aaPredicted RBP10.33□□□□□ -0.76
COL27A1-202ENST00000451716 AHRRA9YTQ3 701 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 ACTL6AO96019 429 aa10.32□□□□□ -0.76
COL27A1-202ENST00000451716 WT1P19544 449 aaPredicted RBP10.32□□□□□ -0.76
COL27A1-202ENST00000451716 APLNRP35414 380 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms