RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 UNQ9370/PRO34162Q6UXP9 181 aa12.23□□□□□ -0.45
ITGB4-202ENST00000449880 NRTNQ99748 197 aa12.23□□□□□ -0.45
ITGB4-202ENST00000449880 TUBA4BQ9H853 241 aa12.23□□□□□ -0.45
ITGB4-202ENST00000449880 DOK5Q9P104 306 aa12.23□□□□□ -0.45
ITGB4-202ENST00000449880 GPR132Q9UNW8 380 aa12.23□□□□□ -0.45
ITGB4-202ENST00000449880 MIA3Q5JRA6 1907 aa12.23□□□□□ -0.45
ITGB4-202ENST00000449880 A0A1W2PPC1 479 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 NGFP01138 241 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 ACAA2P42765 397 aaKnown RBP12.22□□□□□ -0.45
ITGB4-202ENST00000449880 GLIPR1P48060 266 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 TMEM183AQ8IXX5 376 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 MOGAT1Q96PD6 335 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 TP53RKQ96S44 253 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 TRBV9A0A0B4J1U6 114 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 IFI6P09912 130 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 SPEM2Q0P670 501 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 PRDX4Q13162 271 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 SPATA45Q537H7 98 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 SPRED2Q7Z698 418 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 SARGQ9BW04 601 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 NPTNQ9Y639 398 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 TMEM50BP56557 158 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 PTPMT1Q8WUK0 201 aaPredicted RBP12.22□□□□□ -0.45
ITGB4-202ENST00000449880 GPA33Q99795 319 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 SMPD2O60906 423 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 RHBDL1O75783 438 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 TMIGD3P0DMS9 266 aaPredicted RBP12.22□□□□□ -0.45
ITGB4-202ENST00000449880 SSPNQ14714 243 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 ZNF880Q6PDB4 577 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 VN1R4Q7Z5H5 301 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 SLC25A38Q96DW6 304 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 WDR13Q9H1Z4 485 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 RALGAPA2Q2PPJ7 1873 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 NKX2-6A6NCS4 301 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 IFITM10A6NMD0 228 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 PAGE4O60829 102 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 DANCRP0C864 163 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 CD226Q15762 336 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 SMIM12Q96EX1 92 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 OR2V2Q96R30 315 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 MPC1Q9Y5U8 109 aa12.22□□□□□ -0.45
ITGB4-202ENST00000449880 OR2W5A6NFC9 320 aa12.21□□□□□ -0.45
ITGB4-202ENST00000449880 HIST1H1EP10412 219 aaKnown RBP12.21□□□□□ -0.45
ITGB4-202ENST00000449880 LYZL2Q7Z4W2 148 aa12.21□□□□□ -0.45
ITGB4-202ENST00000449880 TRBV5-7A0A0A0MS05 114 aa12.21□□□□□ -0.45
ITGB4-202ENST00000449880 NEURL1O76050 574 aa12.21□□□□□ -0.45
ITGB4-202ENST00000449880 CD74P04233 296 aa12.21□□□□□ -0.45
ITGB4-202ENST00000449880 KIR2DL1P43626 348 aaPredicted RBP12.21□□□□□ -0.45
ITGB4-202ENST00000449880 GUSBP11Q6P575 273 aa12.21□□□□□ -0.45
ITGB4-202ENST00000449880 DTD1Q8TEA8 209 aa12.21□□□□□ -0.45
ITGB4-202ENST00000449880 GPX7Q96SL4 187 aaPredicted RBP12.21□□□□□ -0.45
ITGB4-202ENST00000449880 PMCHL2Q9BQD1 86 aa12.21□□□□□ -0.45
ITGB4-202ENST00000449880 PRR13Q9NZ81 148 aa12.21□□□□□ -0.45
ITGB4-202ENST00000449880 DNASE2O00115 360 aaPredicted RBP12.21□□□□□ -0.46
ITGB4-202ENST00000449880 CA11O75493 328 aa12.21□□□□□ -0.46
ITGB4-202ENST00000449880 SRSF10O75494 262 aaKnown RBP12.21□□□□□ -0.46
ITGB4-202ENST00000449880 SMIM17P0DL12 118 aa12.21□□□□□ -0.46
ITGB4-202ENST00000449880 MYF5P13349 255 aa12.21□□□□□ -0.46
ITGB4-202ENST00000449880 H2BFSP57053 126 aa12.21□□□□□ -0.46
ITGB4-202ENST00000449880 AQP3Q92482 292 aa12.21□□□□□ -0.46
ITGB4-202ENST00000449880 MSL2Q9HCI7 577 aa12.21□□□□□ -0.46
ITGB4-202ENST00000449880 PLA2G3Q9NZ20 509 aa12.21□□□□□ -0.46
ITGB4-202ENST00000449880 ZFP30Q9Y2G7 519 aa12.21□□□□□ -0.46
ITGB4-202ENST00000449880 IER3P46695 156 aa12.21□□□□□ -0.46
ITGB4-202ENST00000449880 OR2Z1Q8NG97 314 aa12.21□□□□□ -0.46
ITGB4-202ENST00000449880 BLNKQ8WV28 456 aa12.21□□□□□ -0.46
ITGB4-202ENST00000449880 MYO7AQ13402 2215 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 ZNF260Q3ZCT1 412 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 SPATA46Q5T0L3 261 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 PRSS41Q7RTY9 318 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 OR4A4PQ8NGN8 299 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 OR13G1Q8NGZ3 307 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 NCBP2LA6PVI3 153 aaKnown RBP12.2□□□□□ -0.46
ITGB4-202ENST00000449880 MEOX1P50221 254 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 C1orf100Q5SVJ3 147 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 HSPB9Q9BQS6 159 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 TMEM38BQ9NVV0 291 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 SPINK4O60575 86 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 ACER2Q5QJU3 275 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 GAPTQ8N292 157 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 DEFB124Q8NES8 71 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 GPR27Q9NS67 375 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 HSF4Q9ULV5 492 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 HELTA6NFD8 242 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 BGLAPP02818 100 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 TMEM108Q6UXF1 575 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 DPF1Q92782 380 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 CHST5Q9GZS9 411 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 LPAR5Q9H1C0 372 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 OR2D2Q9H210 308 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 CORTO00230 105 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 GOSR1O95249 250 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 KIR3DL2P43630 455 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 PPP1CAP62136 330 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 UBE2L3P68036 154 aaKnown RBP12.2□□□□□ -0.46
ITGB4-202ENST00000449880 D2HGDHQ8N465 521 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 STXBP6Q8NFX7 210 aa12.2□□□□□ -0.46
ITGB4-202ENST00000449880 RP1L1Q8IWN7 2480 aaPredicted RBP12.19□□□□□ -0.46
ITGB4-202ENST00000449880 DOCK3Q8IZD9 2030 aa12.19□□□□□ -0.46
ITGB4-202ENST00000449880 A0A087WWC5 75 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms