RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 OPCMLQ14982 345 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 IGFBP7Q16270 282 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 SLC35E4Q6ICL7 350 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 C11orf87Q6NUJ2 197 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 ZNF546Q86UE3 836 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 PPP1R35Q8TAP8 253 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 LRRC29Q8WV35 223 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 PPP1R1CQ8WVI7 109 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 ERGIC1Q969X5 290 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 SEC22AQ96IW7 307 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 C2orf50Q96LR7 162 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 SLC2A9Q9NRM0 540 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 MBNL3Q9NUK0 354 aaKnown RBP8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 UFSP2Q9NUQ7 469 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 KCNIP1Q9NZI2 227 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 FBXO9Q9UK97 447 aaPredicted RBP8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 ZFHX4Q86UP3 3567 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 CHD6Q8TD26 2715 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 ANKRD11Q6UB99 2663 aaPredicted RBP8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 TRBV6-7A0A0A0MS04 114 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 A0A0D9SG52 128 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 ZSCAN5BA6NJL1 495 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 SRRM5B3KS81 715 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 GPR31O00270 319 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 C1QTNF9P0C862 333 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 PSMB6P28072 239 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 GATA4P43694 442 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 ANKRD55Q3KP44 614 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 TRAT1Q6PIZ9 186 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 TEX261Q6UWH6 196 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 ZNF826PQ6ZT77 177 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 LRP11Q86VZ4 500 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 CMTM1Q8IZ96 169 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 LGI3Q8N145 548 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 LRTM2Q8N967 370 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 GALNT11Q8NCW6 608 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 OR8H1Q8NGG4 311 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 MEGF10Q96KG7 1140 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 OR2V2Q96R30 315 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 MFFQ9GZY8 342 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 COQ3Q9NZJ6 369 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 IL19Q9UHD0 177 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 U3KQ87 197 aa8.91□□□□□ -0.98
VIPAS39-203ENST00000448935 TRAV14DV4A0A0A6YYC5 116 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 IGHV3-64DA0A0J9YX35 117 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 TMEM8BA6NDV4 472 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 ABCD4O14678 606 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 TMPRSS2O15393 492 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 B3GALNT1O75752 331 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 OR2F2O95006 317 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 CXCL2P19875 107 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 CHRNB4P30926 498 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 PAX5Q02548 391 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 OR2F1Q13607 317 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 ZNF345Q14585 488 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 HERPUD1Q15011 391 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 HMGN3Q15651 99 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 MSMPQ1L6U9 139 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 FBXL19-AS1Q494R0 122 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 C6orf183Q5T699 404 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 BVESQ8NE79 360 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 PLPPR1Q8TBJ4 325 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 MRPL37Q9BZE1 423 aaKnown RBP8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 SLC5A7Q9GZV3 580 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 ESRP2Q9H6T0 727 aaKnown RBP8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 ZFP57Q9NU63 452 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 DNAJB11Q9UBS4 358 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 OR2W1Q9Y3N9 320 aa8.9□□□□□ -0.99
VIPAS39-203ENST00000448935 CFAP47Q6ZTR5 3102 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 DPRXA6NFQ7 191 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 OOEPA6NGQ2 149 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 WNT9BO14905 357 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 MPPED1O15442 326 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 SPRY3O43610 288 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 RP2O75695 350 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 MPC2O95563 127 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 THBDP07204 575 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 RCC1P18754 421 aaPredicted RBP8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 SSTR2P30874 369 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 TNFAIP6P98066 277 aaPredicted RBP8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 TMEM187Q14656 261 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 ATXN7L3Q14CW9 347 aaPredicted RBP8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 PHLDA2Q53GA4 152 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 ESCO2Q56NI9 601 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 PCSK4Q6UW60 755 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 TMUB2Q71RG4 321 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 H1FOOQ8IZA3 346 aaPredicted RBP8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 INO80EQ8NBZ0 244 aaPredicted RBP8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 OR11L1Q8NGX0 322 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 SECTM1Q8WVN6 248 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 ARL6Q9H0F7 186 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 PRORYQ9H606 182 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 NDRG3Q9UGV2 375 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 RALYQ9UKM9 306 aaKnown RBP8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 MAB21L2Q9Y586 359 aa8.89□□□□□ -0.99
VIPAS39-203ENST00000448935 ATRXP46100 2492 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 CHD3Q12873 2000 aaKnown RBP8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 IGKV1-6A0A0C4DH72 117 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 C3orf85A0A1B0GTC6 90 aa8.88□□□□□ -0.99
VIPAS39-203ENST00000448935 DUXBA0A1W2PPF3 345 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms