RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ZBED5Q49AG3 693 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 AKIRIN2Q53H80 203 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 C6orf10Q5SRN2 563 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 ZNF343Q6P1L6 599 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 ZNF573Q86YE8 665 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 NRMQ8IXM6 262 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 RDH10Q8IZV5 341 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 OR52J3Q8NH60 311 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 RTN4IP1Q8WWV3 396 aaPredicted RBP2.31□□□□□ -2.04
PMS1-215ENST00000447232 EMG1Q92979 244 aaKnown RBP2.31□□□□□ -2.04
PMS1-215ENST00000447232 ALG8Q9BVK2 526 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 ANKRD60Q9BZ19 345 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 RNF167Q9H6Y7 350 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 MRPS18AQ9NVS2 196 aaKnown RBP2.31□□□□□ -2.04
PMS1-215ENST00000447232 PTTG2Q9NZH5 202 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 PEF1Q9UBV8 284 aaKnown RBP2.31□□□□□ -2.04
PMS1-215ENST00000447232 UTP11Q9Y3A2 253 aaKnown RBP2.31□□□□□ -2.04
PMS1-215ENST00000447232 TRBV5-3A0A0A0MS03 114 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 PQLC2LA1A4F0 135 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 ODAMA1E959 279 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 C2orf70A6NJV1 201 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 TRIAP1O43715 76 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 HAND1O96004 215 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 HNRNPCP07910 306 aaKnown RBP eCLIP2.31□□□□□ -2.04
PMS1-215ENST00000447232 SCTP09683 121 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 GABRR1P24046 479 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 ZNF91Q05481 1191 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 IL24Q13007 206 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 MMDQ15546 238 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 C5orf64Q2M2E5 130 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 ACTBL2Q562R1 376 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 SLX4IPQ5VYV7 408 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 SLC16A12Q6ZSM3 486 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 KIRREL3Q8IZU9 778 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 OR8B12Q8NGG6 310 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 OR13A1Q8NGR1 328 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 OR10X1Q8NGY0 326 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 TAMM41Q96BW9 452 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 OSBPL10Q9BXB5 764 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 RAB17Q9H0T7 212 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 PPIL3Q9H2H8 161 aaKnown RBP2.31□□□□□ -2.04
PMS1-215ENST00000447232 CENPMQ9NSP4 180 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 ERGIC3Q9Y282 383 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 IER3IP1Q9Y5U9 82 aa2.31□□□□□ -2.04
PMS1-215ENST00000447232 C13orf42A0A1B0GVH6 325 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 NPIPB11E5RHQ5 1161 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 LOC110117498-PIK3R3F6TDL0 507 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 NDUFB2O95178 105 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 HLA-DQA2P01906 255 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 RPL35AP18077 110 aaKnown RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 MALP21145 153 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 SLC15A1P46059 708 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 GNG10P50151 68 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 C12orf74Q32Q52 190 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 SUMO4Q6EEV6 95 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 LIN54Q6MZP7 749 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 FAHD1Q6P587 224 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 KCTD20Q7Z5Y7 419 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 OR4A5Q8NH83 315 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.3□□□□□ -2.04
PMS1-215ENST00000447232 GALNT14Q96FL9 552 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 COQ2Q96H96 371 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 RITA1Q96K30 269 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 PKNOX2Q96KN3 472 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 NMNAT3Q96T66 252 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 CHRDL1Q9BU40 450 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 PKIBQ9C010 78 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 CSTL1Q9H114 145 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 NIPAL2Q9H841 368 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 ADGRL4Q9HBW9 690 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 RPRD1BQ9NQG5 326 aaKnown RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 MTCH1Q9NZJ7 389 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 IL36RNQ9UBH0 155 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 CORO2BQ9UQ03 480 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 TMA7Q9Y2S6 64 aaKnown RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 A0A1W2PPE3 182 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 DHRS12A0PJE2 317 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 FUOMA2VDF0 154 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 MPTX1A8MV57 137 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 H3BUA1 57 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 CXCR6O00574 342 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 S1PR2O95136 353 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 NDUFA3O95167 84 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 APOC1P02654 83 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 CSN2P05814 226 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 ABHD2P08910 425 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 PPIBP23284 216 aaKnown RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 FUSP35637 526 aaKnown RBP eCLIP2.3□□□□□ -2.04
PMS1-215ENST00000447232 ZNF137PP52743 207 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 CDC42P60953 191 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 RPS16P62249 146 aaKnown RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 CX3CL1P78423 397 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 HAMPP81172 84 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 AESQ08117 197 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 TMEM267Q0VDI3 215 aaPredicted RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 KLF9Q13886 244 aaPredicted RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 ZNF146Q15072 292 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 ODF3L2Q3SX64 289 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 ZNF691Q5VV52 312 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 PLCXD3Q63HM9 321 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms