RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 SOCS1O15524 211 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 YIF1AO95070 293 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 VAMP5O95183 116 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 LYPLA2O95372 231 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 IGHV3-11P01762 117 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 TYMSP04818 313 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR4Q2P0C623 313 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 MLNP12872 115 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 RCVRNP35243 200 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 IFNGR2P38484 337 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 CCR6P51684 374 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 PPP1CAP62136 330 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 LRRC26Q2I0M4 334 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 FAM78AQ5JUQ0 283 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 FAM162BQ5T6X4 162 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 GUSBP11Q6P575 273 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 PRNTQ86SH4 94 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 RIMKLAQ8IXN7 391 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 HS3ST5Q8IZT8 346 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZNF786Q8N393 782 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 Q8N7P7 452 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 LINC01555Q8NAE3 123 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 CCDC112Q8NEF3 446 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR8K1Q8NGG5 319 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR4P4Q8NGL7 312 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZNF414Q96IQ9 312 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 DHRS9Q9BPW9 319 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 MRPS26Q9BYN8 205 aaKnown RBP2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 SLC22A4Q9H015 551 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 HMG20AQ9NP66 347 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 DMAC2Q9NW81 257 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 RBM12B-AS1Q9P1G2 102 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 KLF13Q9Y2Y9 288 aaPredicted RBP2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 SNX10Q9Y5X0 201 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 LAMA3Q16787 3333 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 UNC79Q9P2D8 2635 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 ALS2Q96Q42 1657 aa2.95□□□□□ -1.94
HMGB1P48-201ENST00000446155 KDM6AO15550 1401 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 LRRC37A3O60309 1634 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 FMN2Q9NZ56 1722 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 CENPFP49454 3210 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 IGHV3-72A0A0B4J1Y9 119 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 A0A0G2JMP0 313 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 A0A0X1KG70 313 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 A0A1B0GUA9 196 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 PGPA6NDG6 321 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR6C70A6NIJ9 312 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 METTL15A6NJ78 407 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 FAM183AA6NL82 134 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 C11orf94C9JXX5 98 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 STX10O60499 249 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 EIF1BO60739 113 aaKnown RBP2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 CNMDO75829 334 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 GATBO75879 557 aaKnown RBP2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR2A4O95047 310 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 RPP14O95059 124 aaKnown RBP2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 CA2P00918 260 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 ISG15P05161 165 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 RPS17P08708 135 aaKnown RBP2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 CTXN2P0C2S0 81 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 CECR9P0C854 216 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 ADRB3P13945 408 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 EIF1P41567 113 aaKnown RBP2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 AP2S1P53680 142 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 AP3S2P59780 193 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 ZNF235Q14590 738 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 CLLU1OSQ5K130 101 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 TTC33Q6PID6 262 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 LRRN1Q6UXK5 716 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 FAM231DQ6ZW35 169 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 GALNT10Q86SR1 603 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 GATD1Q8NB37 220 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 CASTOR1Q8WTX7 329 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 ORAOV1Q8WV07 137 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 SRSF12Q8WXF0 261 aaKnown RBP2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 OR2A7Q96R45 310 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 NUDT9Q9BW91 350 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 MS4A6AQ9H2W1 248 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 IFI27L2Q9H2X8 130 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 TRIM45Q9H8W5 580 aaPredicted RBP2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 PDFQ9HBH1 243 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 WFDC1Q9HC57 220 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 PARP11Q9NR21 331 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 GUCA1BQ9UMX6 200 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 LAMA2P24043 3122 aaKnown RBP2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 MUC3AQ02505 3323 aa2.94□□□□□ -1.94
HMGB1P48-201ENST00000446155 YTHDC2Q9H6S0 1430 aaKnown RBP2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 CLTCL1P53675 1640 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 TRPM3Q9HCF6 1732 aaPredicted RBP2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 TRANK1O15050 2925 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 DYSFO75923 2080 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 LMO7Q8WWI1 1683 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 IGKV6-21A0A0C4DH24 114 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 MYBPHLA2RUH7 354 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 C5orf63A6NC05 138 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 CENPBD1B2RD01 187 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 H0YJW9 148 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 BPY2O14599 106 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 ANGPTL7O43827 346 aa2.93□□□□□ -1.94
HMGB1P48-201ENST00000446155 EPPINO95925 133 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms