RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	PTRH2	Q9Y3E5	179 aa	Known RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	UNC80	Q8N2C7	3258 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	PLXNA4	Q9HCM2	1894 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	DAPL1	A0PJW8	107 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329		M0QZQ0	153 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	SERF1A	O75920	110 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	NRAS	P01111	189 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	HBZ	P02008	142 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	ELAVL4	P26378	380 aa	Known RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	GLRX	P35754	106 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	MDH2	P40926	338 aa	Known RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	APOBEC1	P41238	236 aa	Known RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	PNPLA4	P41247	253 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	OR8B8	Q15620	311 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	ANXA2R	Q3ZCQ2	193 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	ZNF658B	Q4V348	819 aa	Predicted RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	CLEC12A	Q5QGZ9	265 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	H1FNT	Q75WM6	255 aa	Predicted RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	ACOT1	Q86TX2	421 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	CLECL1	Q8IZS7	167 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	ZNF611	Q8N823	705 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	FGF11	Q92914	225 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	SUSD3	Q96L08	255 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	RBM24	Q9BX46	236 aa	Known RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	OR51I1	Q9H343	314 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	ENY2	Q9NPA8	101 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	PNRC2	Q9NPJ4	139 aa	Known RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	TP73-AS1	Q9UF72	201 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	NLRC5	Q86WI3	1866 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	TRAV38-1	A0A0B4J264	116 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	ZNF736	B4DX44	427 aa	Predicted RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	ZNF878	C9JN71	531 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329		F5H768	121 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329		J3QLW9	94 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	SDCBP	O00560	298 aa	Predicted RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	NRG2	O14511	850 aa	Predicted RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	HMGB3	O15347	200 aa	Known RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	CELA3B	P08861	270 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	ZNF17	P17021	662 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	EDNRA	P25101	427 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	RHOA	P61586	193 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	ZXDC	Q2QGD7	858 aa	Predicted RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	RSPO2	Q6UXX9	243 aa	Predicted RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	SLC25A42	Q86VD7	318 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	OR51G1	Q8NGK1	321 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	KCNG3	Q8TAE7	436 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	ST6GALNAC6	Q969X2	333 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	MSI2	Q96DH6	328 aa	Known RBP	5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	NDC1	Q9BTX1	674 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	PLA2G12A	Q9BZM1	189 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	MS4A5	Q9H3V2	200 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	EGLN3	Q9H6Z9	239 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	KCNIP1	Q9NZI2	227 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	KCNE3	Q9Y6H6	103 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	PDE4DIP	Q5VU43	2346 aa		5.88	□□□□□ -1.47
TRIM6-205	ENST00000445329	BORCS7-ASMT	A0A0B4J1R7	106 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	SLC22A20	A6NK97	555 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	CCL22	O00626	93 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	FFAR1	O14842	300 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	LYL1	P12980	280 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	ADRA2C	P18825	462 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	ZNF93	P35789	620 aa	Predicted RBP	5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	PBX2	P40425	430 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	OR3A4P	P47883	348 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	LCN6	P62502	163 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	LCN2	P80188	198 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	ITPRIPL2	Q3MIP1	535 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	C12orf54	Q6X4T0	127 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	C8orf86	Q6ZUL3	223 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	COMMD6	Q7Z4G1	85 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	MEX3D	Q86XN8	651 aa	Known RBP	5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	TMEM251	Q8N6I4	163 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	TMEM99	Q8N816	258 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	CDRT4	Q8N9R6	151 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	CLEC1A	Q8NC01	280 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	OR2K2	Q8NGT1	345 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	OR2T10	Q8NGZ9	312 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	OR10G6	Q8NH81	332 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	TRIB1	Q96RU8	372 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	POPDC3	Q9HBV1	291 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	HRASLS2	Q9NWW9	162 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	KLRF1	Q9NZS2	232 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	NYNRIN	Q9P2P1	1898 aa	Known RBP	5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329		A0A1W2PRE2	83 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	MYBPHL	A2RUH7	354 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	TAPBP	O15533	448 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	CA1	P00915	261 aa	Predicted RBP	5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	IL2RA	P01589	272 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	HLA-H	P01893	362 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	CAT	P04040	527 aa	Known RBP	5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	EDN2	P20800	178 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	IGFBP4	P22692	258 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	SLC6A12	P48065	614 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	LIM2	P55344	173 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	TAS2R31	P59538	309 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	TAF10	Q12962	218 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	POM121L1P	Q3SYA9	428 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	SLC25A53	Q5H9E4	307 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	PAQR9	Q6ZVX9	377 aa		5.87	□□□□□ -1.47
TRIM6-205	ENST00000445329	BAGE3	Q86Y29	109 aa		5.87	□□□□□ -1.47

Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms