RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 BRICD5Q6PL45 260 aa15.02■□□□□ -0
CCDC188-202ENST00000444532 ZNF497Q6ZNH5 498 aa15.02■□□□□ -0
CCDC188-202ENST00000444532 ZNF367Q7RTV3 350 aa15.02■□□□□ -0
CCDC188-202ENST00000444532 OR9G1Q8NH87 305 aa15.02■□□□□ -0
CCDC188-202ENST00000444532 Q96M66 194 aa15.02■□□□□ -0
CCDC188-202ENST00000444532 RANBP3Q9H6Z4 567 aaPredicted RBP15.02■□□□□ -0
CCDC188-202ENST00000444532 A6NDX4 124 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 BUB1B-PAK6H3BSN5 160 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 MT-ND4P03905 459 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 FUT3P21217 361 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 GABRA5P31644 462 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 ARHGDIBP52566 201 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 RAB12Q6IQ22 244 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 OR4C13Q8NGP0 309 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 RFESDQ8TAC1 157 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 NPFFR1Q9GZQ6 430 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 ZNF696Q9H7X3 374 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 ACOT13Q9NPJ3 140 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 PEX16Q9Y5Y5 336 aa15.01□□□□□ -0.01
CCDC188-202ENST00000444532 TRAV39A0A0B4J263 110 aa15□□□□□ -0.01
CCDC188-202ENST00000444532 OOSP1A8MZH6 123 aa15□□□□□ -0.01
CCDC188-202ENST00000444532 F2RL2O00254 374 aa15□□□□□ -0.01
CCDC188-202ENST00000444532 ORC5O43913 435 aa15□□□□□ -0.01
CCDC188-202ENST00000444532 CHST1O43916 411 aa15□□□□□ -0.01
CCDC188-202ENST00000444532 CA11O75493 328 aa15□□□□□ -0.01
CCDC188-202ENST00000444532 HTR2CP28335 458 aa15□□□□□ -0.01
CCDC188-202ENST00000444532 BRS3P32247 399 aa15□□□□□ -0.01
CCDC188-202ENST00000444532 CCBE1Q6UXH8 406 aaPredicted RBP15□□□□□ -0.01
CCDC188-202ENST00000444532 KCNG3Q8TAE7 436 aa15□□□□□ -0.01
CCDC188-202ENST00000444532 CITED1Q99966 193 aa15□□□□□ -0.01
CCDC188-202ENST00000444532 YTHDF1Q9BYJ9 559 aaKnown RBP15□□□□□ -0.01
CCDC188-202ENST00000444532 MMP28Q9H239 520 aa15□□□□□ -0.01
CCDC188-202ENST00000444532 LY6LH3BQJ8 138 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 J3QR06 171 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 AIPO00170 330 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 SLC22A1O15245 554 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 VSIG8P0DPA2 414 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 SSTR5P35346 364 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 FABP5Q01469 135 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 EMX1Q04741 257 aaPredicted RBP14.99□□□□□ -0.01
CCDC188-202ENST00000444532 PRR31Q5SQ13 230 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 CCDC144NLQ6NUI1 221 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 C11orf88Q6PI97 169 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 GAPTQ8N292 157 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 OR52M1Q8NGK5 317 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 OR6M1Q8NGM8 313 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 CCDC107Q8WV48 283 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 FAM46BQ96A09 425 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 ETAA1Q9NY74 926 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 PSG11Q9UQ72 335 aa14.99□□□□□ -0.01
CCDC188-202ENST00000444532 AMMECR1Q9Y4X0 333 aaPredicted RBP14.99□□□□□ -0.01
CCDC188-202ENST00000444532 C15orf65H3BRN8 121 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 PDCD6O75340 191 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 BPNT1O95861 308 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 MPIG6BO95866 241 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 JUNBP17275 347 aaPredicted RBP14.98□□□□□ -0.01
CCDC188-202ENST00000444532 RANBP1P43487 201 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 SRSF4Q08170 494 aaKnown RBP14.98□□□□□ -0.01
CCDC188-202ENST00000444532 UTF1Q5T230 341 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 TPTE2P1Q5T6R2 138 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 SIGIRRQ6IA17 410 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 SVOPQ8N4V2 548 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 OR2T6Q8NHC8 308 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 ARL11Q969Q4 196 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 RAB9BQ9NP90 201 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 TRAPPC2LQ9UL33 140 aa14.98□□□□□ -0.01
CCDC188-202ENST00000444532 CALRP27797 417 aaKnown RBP14.97□□□□□ -0.01
CCDC188-202ENST00000444532 PSMD7P51665 324 aa14.97□□□□□ -0.01
CCDC188-202ENST00000444532 KRTAP10-3P60369 221 aa14.97□□□□□ -0.01
CCDC188-202ENST00000444532 RPS27AP62979 156 aaKnown RBP14.97□□□□□ -0.01
CCDC188-202ENST00000444532 LTC4SQ16873 150 aa14.97□□□□□ -0.01
CCDC188-202ENST00000444532 SYT6Q5T7P8 510 aaPredicted RBP14.97□□□□□ -0.01
CCDC188-202ENST00000444532 TRAT1Q6PIZ9 186 aa14.97□□□□□ -0.01
CCDC188-202ENST00000444532 TMEM219Q86XT9 240 aa14.97□□□□□ -0.01
CCDC188-202ENST00000444532 LEAP2Q969E1 77 aa14.97□□□□□ -0.01
CCDC188-202ENST00000444532 TMEM59Q9BXS4 323 aa14.97□□□□□ -0.01
CCDC188-202ENST00000444532 LRRC42Q9Y546 428 aa14.97□□□□□ -0.01
CCDC188-202ENST00000444532 NBEAL1Q6ZS30 2694 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 UBE2QL1A1L167 161 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 TMEM14DPA8MWL7 114 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 SLC17A2O00624 439 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 IGHV3-7P01780 117 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 MNDAP41218 407 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 EFNB2P52799 333 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 QRFPP83859 136 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 MADCAM1Q13477 382 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 SSX1Q16384 188 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 TMEM30BQ3MIR4 351 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 C6orf183Q5T699 404 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 OR10K2Q6IF99 312 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 C16orf82Q7Z2V1 217 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 NEDD4LQ96PU5 975 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 GFI1Q99684 422 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 TM2D1Q9BX74 207 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 PLGRKTQ9HBL7 147 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 NDUFB11Q9NX14 153 aa14.96□□□□□ -0.01
CCDC188-202ENST00000444532 AK6Q9Y3D8 172 aaKnown RBP14.96□□□□□ -0.01
CCDC188-202ENST00000444532 SDCBPO00560 298 aaPredicted RBP14.95□□□□□ -0.02
CCDC188-202ENST00000444532 TIMM23O14925 209 aa14.95□□□□□ -0.02
CCDC188-202ENST00000444532 SPINT2O43291 252 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms