RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 DNAJC5Q9H3Z4 198 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 FGF22Q9HCT0 170 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 TBX21Q9UL17 535 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 PARP14Q460N5 1801 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 ANKRD31Q8N7Z5 1873 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 LRRK1Q38SD2 2015 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 TTRP02766 147 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 OR5AS1Q8N127 324 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 MRPL30Q8TCC3 161 aaKnown RBP4.37□□□□□ -1.71
HERC1-201ENST00000443617 TMEM106BQ9NUM4 274 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 IGKV1D-8A0A087WSZ0 117 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 TNFP01375 233 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 STUMQ69YW2 141 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 OR10G8Q8NGN5 311 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 TRPM7Q96QT4 1865 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 A0A0G2JMZ2 1700 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 LRRC37A2A6NM11 1700 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 UBE2L5PA0A1B0GUS4 154 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 UBE2NP61088 152 aaKnown RBP4.37□□□□□ -1.71
HERC1-201ENST00000443617 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.37□□□□□ -1.71
HERC1-201ENST00000443617 SGCZQ96LD1 299 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 NXF5Q9H1B4 397 aaKnown RBP4.37□□□□□ -1.71
HERC1-201ENST00000443617 HSPB7Q9UBY9 170 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 SCN10AQ9Y5Y9 1956 aa4.37□□□□□ -1.71
HERC1-201ENST00000443617 TRAV39A0A0B4J263 110 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 OR2J2O76002 312 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 HLA-DOBP13765 273 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 PDLIM4P50479 330 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 Q6ZSR6 202 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 OR8B12Q8NGG6 310 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 OR4D5Q8NGN0 318 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 LIPT2A6NK58 231 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 NXPH2O95156 264 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 AMTP48728 403 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 TEX43Q6ZNM6 134 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 DEFB132Q7Z7B7 95 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 GJC3Q8NFK1 279 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 MSI2Q96DH6 328 aaKnown RBP4.36□□□□□ -1.71
HERC1-201ENST00000443617 COL11A1P12107 1806 aaPredicted RBP4.36□□□□□ -1.71
HERC1-201ENST00000443617 VDAC1P21796 283 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 HINT1P49773 126 aaPredicted RBP4.36□□□□□ -1.71
HERC1-201ENST00000443617 SERF2P84101 59 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 EGR4Q05215 589 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 WIPF3A6NGB9 483 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 NRASP01111 189 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 KRASP01116 189 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 SNAI3Q3KNW1 292 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 BRICD5Q6PL45 260 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 CYP2G1PQ6ZSU1 146 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 TMEM256Q8N2U0 113 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 OR51H1Q8NH63 302 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 BORCS7Q96B45 105 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 TM4SF19Q96DZ7 209 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 OR4C12Q96R67 309 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 TPSD1Q9BZJ3 242 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 PTRH2Q9Y3E5 179 aaKnown RBP4.36□□□□□ -1.71
HERC1-201ENST00000443617 KIR2DS1A0A191URI9 304 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 K7EP13 123 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 CEBPBP17676 345 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 KIR2DS4P43632 304 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 KIR2DS1Q14954 304 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 ST8SIA1Q92185 356 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 THAP10Q9P2Z0 257 aaPredicted RBP4.36□□□□□ -1.71
HERC1-201ENST00000443617 PLXNA1Q9UIW2 1896 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 CUL9Q8IWT3 2517 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 OR7C1O76099 320 aaPredicted RBP4.36□□□□□ -1.71
HERC1-201ENST00000443617 ZNF468Q5VIY5 522 aaPredicted RBP4.36□□□□□ -1.71
HERC1-201ENST00000443617 OR1L6Q8NGR2 347 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 PLA2G3Q9NZ20 509 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 CACNG5Q9UF02 275 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 SLC45A2Q9UMX9 530 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 PFN1P07737 140 aaKnown RBP4.36□□□□□ -1.71
HERC1-201ENST00000443617 COX5AP20674 150 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 TMEM211Q6ICI0 200 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.36□□□□□ -1.714e-8■■■■■ 39.6
HERC1-201ENST00000443617 AP1S3Q96PC3 154 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 SLC25A22Q9H936 323 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 TMEM74BQ9NUR3 256 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 CD33P20138 364 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 FBXW9Q5XUX1 488 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 SFTPA1Q8IWL2 248 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 OR1N1Q8NGS0 311 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 DNASE2BQ8WZ79 361 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 WDR73Q6P4I2 378 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 MRGPRDQ8TDS7 321 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 TM2D1Q9BX74 207 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 CBLN1P23435 193 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 PMP22Q01453 160 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 MYBPHQ13203 477 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 RTL10Q7L3V2 364 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 Q96M66 194 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 KLRF1Q9NZS2 232 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 NRG2O14511 850 aaPredicted RBP4.36□□□□□ -1.71
HERC1-201ENST00000443617 SPANXN5Q5MJ07 72 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 AGBL5Q8NDL9 886 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 METTL7AQ9H8H3 244 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 LAMTOR2Q9Y2Q5 125 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 KIR2DL5BA0A0G2JN68 375 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 KIR2DL5BA0A0G2JPC4 375 aa4.36□□□□□ -1.71
HERC1-201ENST00000443617 AQP7P3A6NL99 342 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms