RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 SNRPBP14678 240 aaKnown RBP10.04□□□□□ -0.8
USP1-203ENST00000442679 NFYBP25208 207 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 GDNFP39905 211 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 LGALS4P56470 323 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 TMEM50BP56557 158 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 NCS1P62166 190 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 DYNC1I2Q13409 638 aaKnown RBP10.04□□□□□ -0.8
USP1-203ENST00000442679 FAM189A2Q15884 450 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 IDNKQ5T6J7 187 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 GPR107Q5VW38 600 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 BAIAP2L2Q6UXY1 529 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 Q6ZTK2 550 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 GPR141Q7Z602 305 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 RTN4RL2Q86UN3 420 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 ANKRD13BQ86YJ7 626 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 OR11H6Q8NGC7 330 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 OR4K15Q8NH41 348 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 ARL11Q969Q4 196 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 PTX4Q96A99 478 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 ARHGAP5-AS1Q96IT6 56 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 PRDM13Q9H4Q3 707 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 LINC00574Q9H8X3 128 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 ESM1Q9NQ30 184 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 IDI2-AS1Q9NZ38 188 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 HSF4Q9ULV5 492 aa10.04□□□□□ -0.8
USP1-203ENST00000442679 IGHV2-26A0A0B4J1V2 119 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 NPIPB11E5RHQ5 1161 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 ORC5O43913 435 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 PAHP00439 452 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 FBP1P09467 338 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 SSTR5P35346 364 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 SERPINB10P48595 397 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 VBP1P61758 197 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 LTC4SQ16873 150 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 C6orf183Q5T699 404 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 Q6YL49 198 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 SLC16A12Q6ZSM3 486 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 CROCCP3Q8IVE0 287 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 ABHD12Q8N2K0 398 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 ZDHHC22Q8N966 263 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 OR10A7Q8NGE5 316 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 OR10R2Q8NGX6 335 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 MRPL30Q8TCC3 161 aaKnown RBP10.03□□□□□ -0.8
USP1-203ENST00000442679 C17orf50Q8WW18 174 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 KIRREL1Q96J84 757 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 CLEC7AQ9BXN2 247 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 PECRQ9BY49 303 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 NAA50Q9GZZ1 169 aaKnown RBP10.03□□□□□ -0.8
USP1-203ENST00000442679 ATG5Q9H1Y0 275 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 CHMP1AQ9HD42 196 aaPredicted RBP10.03□□□□□ -0.8
USP1-203ENST00000442679 KCNIP1Q9NZI2 227 aa10.03□□□□□ -0.8
USP1-203ENST00000442679 FAM172BPA6NC97 362 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 DNAJC9-AS1A6NH13 148 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 ODF3BA8MYP8 253 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 C12orf77C9JDV5 145 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 C15orf65H3BRN8 121 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 TOR1AO14656 332 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 SPINT2O43291 252 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 HOXA3O43365 443 aaPredicted RBP10.02□□□□□ -0.81
USP1-203ENST00000442679 MELTFP08582 738 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 RCC1P18754 421 aaPredicted RBP10.02□□□□□ -0.81
USP1-203ENST00000442679 RPL5P46777 297 aaKnown RBP10.02□□□□□ -0.81
USP1-203ENST00000442679 KRTAP21-3Q3LHN1 58 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 MOGAT2Q3SYC2 334 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 PLAC9Q5JTB6 97 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 ZNF626Q68DY1 528 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 TRAT1Q6PIZ9 186 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 UBALD1Q8TB05 177 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 LGALS14Q8TCE9 139 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 RAB3CQ96E17 227 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 AJUBAQ96IF1 538 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 DUX5Q96PT3 197 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 RIMS4Q9H426 269 aaPredicted RBP10.02□□□□□ -0.81
USP1-203ENST00000442679 ZNF286AQ9HBT8 521 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 RAB9BQ9NP90 201 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 AK3Q9UIJ7 227 aa10.02□□□□□ -0.81
USP1-203ENST00000442679 FBN1P35555 2871 aaKnown RBP10.02□□□□□ -0.81
USP1-203ENST00000442679 A0A087X0M5 115 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 A0A1B0GX30 115 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 TRIM77I1YAP6 450 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 RAB27BO00194 218 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 TMEM127O75204 238 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 GABARAPO95166 117 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 NAPSAO96009 420 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 CD34P28906 385 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 PRRX1P54821 245 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 SCAND1P57086 179 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 UBA52P62987 128 aaKnown RBP10.01□□□□□ -0.81
USP1-203ENST00000442679 SLC9A3R2Q15599 337 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 CTF1Q16619 201 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 UTF1Q5T230 341 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 OLFML2AQ68BL7 652 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 LHFPL4Q7Z7J7 247 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 LDLRAD3Q86YD5 345 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 PRR18Q8N4B5 295 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 OR5H6Q8NGV6 325 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 SETD6Q8TBK2 473 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 SSMEM1Q8WWF3 244 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 LEAP2Q969E1 77 aa10.01□□□□□ -0.81
USP1-203ENST00000442679 TAF9BQ9HBM6 251 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms