RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 MT-ND4P03905 459 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 DYNLT3P51808 116 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 PRRX1P54821 245 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 RBM39Q14498 530 aaKnown RBP19.06■□□□□ 0.64
VARS-217ENST00000440048 LTC4SQ16873 150 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 SIGIRRQ6IA17 410 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 OR10K2Q6IF99 312 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 LIAT1Q6ZQX7 453 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 CCDC107Q8WV48 283 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 GFI1Q99684 422 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 RAB18Q9NP72 206 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 TCF19Q9Y242 345 aa19.06■□□□□ 0.64
VARS-217ENST00000440048 SLC22A1O15245 554 aa19.05■□□□□ 0.64
VARS-217ENST00000440048 CHST1O43916 411 aa19.05■□□□□ 0.64
VARS-217ENST00000440048 VSIG8P0DPA2 414 aa19.05■□□□□ 0.64
VARS-217ENST00000440048 GZMHP20718 246 aa19.05■□□□□ 0.64
VARS-217ENST00000440048 FUT3P21217 361 aa19.05■□□□□ 0.64
VARS-217ENST00000440048 HTR2CP28335 458 aa19.05■□□□□ 0.64
VARS-217ENST00000440048 HLA-DRB5Q30154 266 aa19.05■□□□□ 0.64
VARS-217ENST00000440048 CCBE1Q6UXH8 406 aaPredicted RBP19.05■□□□□ 0.64
VARS-217ENST00000440048 SVOPQ8N4V2 548 aa19.05■□□□□ 0.64
VARS-217ENST00000440048 OR10A7Q8NGE5 316 aa19.05■□□□□ 0.64
VARS-217ENST00000440048 YTHDF1Q9BYJ9 559 aaKnown RBP19.05■□□□□ 0.64
VARS-217ENST00000440048 A6NDX4 124 aa19.04■□□□□ 0.64
VARS-217ENST00000440048 LEUTXA8MZ59 168 aa19.04■□□□□ 0.64
VARS-217ENST00000440048 CALRP27797 417 aaKnown RBP19.04■□□□□ 0.64
VARS-217ENST00000440048 PROK1P58294 105 aa19.04■□□□□ 0.64
VARS-217ENST00000440048 SRSF4Q08170 494 aaKnown RBP19.04■□□□□ 0.64
VARS-217ENST00000440048 SPARTQ8N0X7 666 aa19.04■□□□□ 0.64
VARS-217ENST00000440048 OR6M1Q8NGM8 313 aa19.04■□□□□ 0.64
VARS-217ENST00000440048 OR9G1Q8NH87 305 aa19.04■□□□□ 0.64
VARS-217ENST00000440048 LEAP2Q969E1 77 aa19.04■□□□□ 0.64
VARS-217ENST00000440048 CYYR1Q96J86 154 aa19.04■□□□□ 0.64
VARS-217ENST00000440048 KCNK15Q9H427 330 aa19.04■□□□□ 0.64
VARS-217ENST00000440048 ETAA1Q9NY74 926 aa19.04■□□□□ 0.64
VARS-217ENST00000440048 AK6Q9Y3D8 172 aaKnown RBP19.04■□□□□ 0.64
VARS-217ENST00000440048 C15orf65H3BRN8 121 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 BUB1B-PAK6H3BSN5 160 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 AIPO00170 330 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 F2RL2O00254 374 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 PDCD6O75340 191 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 IGHV3-7P01780 117 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 GLAP06280 429 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 TMEM219Q86XT9 240 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 ARL11Q969Q4 196 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 CREB3L1Q96BA8 519 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 NDUFB11Q9NX14 153 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 LRRC42Q9Y546 428 aa19.03■□□□□ 0.64
VARS-217ENST00000440048 LY6LH3BQJ8 138 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 H3BUI4 141 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 J3QR06 171 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 SLC17A2O00624 439 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 BPNT1O95861 308 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 CEACAM3P40198 252 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 KRTAP10-3P60369 221 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 RPS27AP62979 156 aaKnown RBP19.02■□□□□ 0.64
VARS-217ENST00000440048 QRFPP83859 136 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 UNC119Q13432 240 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 UBE2UQ5VVX9 321 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 GAPTQ8N292 157 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 OR4K15Q8NH41 348 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 KCNG3Q8TAE7 436 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 UBALD1Q8TB05 177 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 TMEM59Q9BXS4 323 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 MMP28Q9H239 520 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 PLGRKTQ9HBL7 147 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 PITPNC1Q9UKF7 332 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 PSG11Q9UQ72 335 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 TRRAPQ9Y4A5 3859 aa19.02■□□□□ 0.64
VARS-217ENST00000440048 UBE2QL1A1L167 161 aa19.01■□□□□ 0.63
VARS-217ENST00000440048 TMEM14DPA8MWL7 114 aa19.01■□□□□ 0.63
VARS-217ENST00000440048 ORC5O43913 435 aa19.01■□□□□ 0.63
VARS-217ENST00000440048 P2RY14Q15391 338 aa19.01■□□□□ 0.63
VARS-217ENST00000440048 TPTE2P1Q5T6R2 138 aa19.01■□□□□ 0.63
VARS-217ENST00000440048 SYT6Q5T7P8 510 aaPredicted RBP19.01■□□□□ 0.63
VARS-217ENST00000440048 SLC16A12Q6ZSM3 486 aa19.01■□□□□ 0.63
VARS-217ENST00000440048 OR4C13Q8NGP0 309 aa19.01■□□□□ 0.63
VARS-217ENST00000440048 RANBP3Q9H6Z4 567 aaPredicted RBP19.01■□□□□ 0.63
VARS-217ENST00000440048 FBLN5Q9UBX5 448 aa19.01■□□□□ 0.63
VARS-217ENST00000440048 TRAPPC2LQ9UL33 140 aa19.01■□□□□ 0.63
VARS-217ENST00000440048 CA11O75493 328 aa19■□□□□ 0.63
VARS-217ENST00000440048 KIR2DS4P43632 304 aa19■□□□□ 0.63
VARS-217ENST00000440048 GNG10P50151 68 aa19■□□□□ 0.63
VARS-217ENST00000440048 NKAPLQ5M9Q1 402 aa19■□□□□ 0.63
VARS-217ENST00000440048 CD200R1LQ6Q8B3 271 aa19■□□□□ 0.63
VARS-217ENST00000440048 TM2D1Q9BX74 207 aa19■□□□□ 0.63
VARS-217ENST00000440048 NPFFR1Q9GZQ6 430 aa19■□□□□ 0.63
VARS-217ENST00000440048 ZNF696Q9H7X3 374 aa19■□□□□ 0.63
VARS-217ENST00000440048 SIGLEC9Q9Y336 463 aa19■□□□□ 0.63
VARS-217ENST00000440048 C12orf77C9JDV5 145 aa18.99■□□□□ 0.63
VARS-217ENST00000440048 CHATP28329 748 aa18.99■□□□□ 0.63
VARS-217ENST00000440048 RAB11BQ15907 218 aa18.99■□□□□ 0.63
VARS-217ENST00000440048 OR52M1Q8NGK5 317 aa18.99■□□□□ 0.63
VARS-217ENST00000440048 NEDD4LQ96PU5 975 aa18.99■□□□□ 0.63
VARS-217ENST00000440048 CITED1Q99966 193 aa18.99■□□□□ 0.63
VARS-217ENST00000440048 NICN1Q9BSH3 213 aa18.99■□□□□ 0.63
VARS-217ENST00000440048 AMMECR1Q9Y4X0 333 aaPredicted RBP18.99■□□□□ 0.63
VARS-217ENST00000440048 TRDV1A0A1B0GX56 115 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 OOSP1A8MZH6 123 aa18.98■□□□□ 0.63
VARS-217ENST00000440048 CCRL2O00421 344 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms