RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 LTC4SQ16873 150 aa12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 SLC22A6Q4U2R8 563 aa12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 OXLD1Q5BKU9 147 aa12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 CDH26Q8IXH8 852 aa12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 DRAM1Q8N682 238 aa12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 ZFP41Q8N8Y5 198 aa12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 OR52M1Q8NGK5 317 aa12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 OR10X1Q8NGY0 326 aa12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 MRPS24Q96EL2 167 aaKnown RBP12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 OR14A2Q96R54 314 aa12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 SPACA1Q9HBV2 294 aa12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 RCC2Q9P258 522 aaKnown RBP12.94□□□□□ -0.34
SNRPD3-204ENST00000439775 TRAV39A0A0B4J263 110 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 A0A1W2PP11 408 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 A0A1W2PRX2 142 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 TCRBV4S1A1TA0A5B7 111 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 SH2D7A6NKC9 451 aaPredicted RBP12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 FGF16O43320 207 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 CD1AP06126 327 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 PF4V1P10720 104 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 CAPGP40121 348 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 ZNF816Q0VGE8 651 aaPredicted RBP12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 DIAPH2-AS1Q14236 149 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 ZNF497Q6ZNH5 498 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 C8orf59Q8N0T1 100 aaPredicted RBP12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 C8orf31Q8N9H6 132 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 WFDC9Q8NEX5 89 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 FBLIM1Q8WUP2 373 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 MYDGFQ969H8 173 aa12.93□□□□□ -0.34
SNRPD3-204ENST00000439775 HSD17B6O14756 317 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 CASQ2O14958 399 aaPredicted RBP12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 ORC5O43913 435 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 GNAO1P09471 354 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 TMEM11P17152 192 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 Q3ZCU0 254 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 ATAD3CQ5T2N8 411 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 OGFRL1Q5TC84 451 aaPredicted RBP12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 LAIR2Q6ISS4 152 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 LINC00311Q8N616 119 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 C5orf56Q8N8D9 126 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 THRSPQ92748 146 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 ARL11Q969Q4 196 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 MUL1Q969V5 352 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 PHF21AQ96BD5 680 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 DERL3Q96Q80 235 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 PLCXD1Q9NUJ7 323 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 NECAP2Q9NVZ3 263 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 PSORS1C1Q9UIG5 152 aa12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 MRPS28Q9Y2Q9 187 aaKnown RBP12.92□□□□□ -0.34
SNRPD3-204ENST00000439775 AIPO00170 330 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 SDCBPO00560 298 aaPredicted RBP12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 MYL12BO14950 172 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 MT-ND4P03905 459 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 CD33P20138 364 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 WNT4P56705 351 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 LOXL3P58215 753 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 DOC2BQ14184 412 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 EBI3Q14213 229 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 HES1Q14469 280 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 TMEM30BQ3MIR4 351 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 C9orf152Q5JTZ5 239 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 AWAT2Q6E213 333 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 C10orf99Q6UWK7 81 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 GLIPR1L1Q6UWM5 242 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 Q6ZPA2 131 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 LYPD6Q86Y78 171 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 IZUMO1Q8IYV9 350 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 STX19Q8N4C7 294 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 JAGN1Q8N5M9 183 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 NKAIN3Q8N8D7 197 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 NEK7Q8TDX7 302 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 RAB9BQ9NP90 201 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 GFOD1Q9NXC2 390 aa12.91□□□□□ -0.34
SNRPD3-204ENST00000439775 NOTCH3Q9UM47 2321 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 IGHV1-3A0A0C4DH29 117 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 PNMA8CA0A1B0GUJ8 204 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 A0A1W2PPE3 182 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 PSMB11A5LHX3 300 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 FAM90A10PA6NDY2 464 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 FAM90A7PA6NKC0 464 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 FAM90A23PA8MXZ1 464 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 CCRL2O00421 344 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 IGKV1D-33P01593 117 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 IGKV1-33P01594 117 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 PF4P02776 101 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 PRB2P02812 416 aaPredicted RBP12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 GAPDHP04406 335 aaKnown RBP12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 CELP19835 753 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 MAPK3P27361 379 aaPredicted RBP12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 AHSA2Q719I0 299 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 GAPTQ8N292 157 aa12.9□□□□□ -0.34
SNRPD3-204ENST00000439775 A0A1W2PPK0 400 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 MCRIP1C9JLW8 97 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 CA11O75493 328 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 SC5DO75845 299 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 MAS1P04201 325 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 SLC35A2P78381 396 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 C6orf183Q5T699 404 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 RAB12Q6IQ22 244 aa12.89□□□□□ -0.35
SNRPD3-204ENST00000439775 TRAT1Q6PIZ9 186 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms