RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 I3L4J1 428 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 K7EQD1 137 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 BANF1O75531 89 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 LYPLA1O75608 230 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZFAND5O76080 213 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR2A4O95047 310 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 GADD45GO95257 159 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 CGAP01215 116 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 IGHG2P01859 326 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 SNRPCP09234 159 aaKnown RBP2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR4A8P0C604 315 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 METTL15P1P0C7V9 234 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 CT45A10P0DMU9 189 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 FOLR2P14207 255 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 KLK2P20151 261 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 MYL9P24844 172 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 CD70P32970 193 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 BTCP35070 178 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 PHBP35232 272 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 DRD3P35462 400 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 RPL35P42766 123 aaKnown RBP2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 VEGFCP49767 419 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 WNT4P56705 351 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 INCA1Q0VD86 236 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 BAMBIQ13145 260 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 C1DQ13901 141 aaKnown RBP2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR8B8Q15620 311 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 ATP6AP1LQ52LC2 224 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF506Q5JVG8 444 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 ANKRD22Q5VYY1 191 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZFAND6Q6FIF0 208 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 SLC35E4Q6ICL7 350 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 AGTRAPQ6RW13 159 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 FA2HQ7L5A8 372 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 PTAR1Q7Z6K3 402 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 C17orf82Q86X59 251 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 FAM71E2Q8N5Q1 922 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 DEFB125Q8N687 156 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR11H6Q8NGC7 330 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR5AP2Q8NGF4 316 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR2A12Q8NGT7 310 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR10J6PQ8NGY7 276 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 FLVCR1-AS1Q8TAF5 88 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 GPR119Q8TDV5 335 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 LRRC29Q8WV35 223 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 CCL17Q92583 94 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 PTX4Q96A99 478 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 CNRIP1Q96F85 164 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 AURKBQ96GD4 344 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR2A7Q96R45 310 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 SERPINI1Q99574 410 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 TMEM222Q9H0R3 208 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 IL25Q9H293 177 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 OR51I2Q9H344 312 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 FAIMQ9NVQ4 179 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF226Q9NYT6 803 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 CALML5Q9NZT1 146 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 PCYOX1Q9UHG3 505 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 SHPKQ9UHJ6 478 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 HSPB8Q9UJY1 196 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 DHX57Q6P158 1386 aaKnown RBP2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 PTPRKQ15262 1439 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 GRIN2BQ13224 1484 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 FANCD2Q9BXW9 1451 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 ZNF608Q9ULD9 1512 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 DENND4AQ7Z401 1863 aa2.81□□□□□ -1.96
HMGB1P12-201ENST00000438594 FYCO1Q9BQS8 1478 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 OVOS2A0A0J9YW53 1432 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 OVOS2Q6IE36 1432 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 KIF15Q9NS87 1388 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 IGSF9BQ9UPX0 1349 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 TRAV8-6A0A0B4J262 113 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 IGHV3-38A0A0C4DH36 116 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 TEX48A0A1B0GUV7 120 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 GMNCA6NCL1 334 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 INMT-MINDY4F8WBC2 141 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 NDUFS5O43920 106 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 MMP23AO75900 390 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 DHRS3O75911 302 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 SUPT7LO94864 414 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 TNFSF15O95150 251 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 CDRT1O95170 752 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 IGHMP01871 453 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 UBBP0CG47 229 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 FGF6P10767 208 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 ERGP11308 486 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 MUC1P15941 1255 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 SPI1P17947 270 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 IL1RNP18510 177 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 FMO3P31513 532 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 RPL34P49207 117 aaKnown RBP2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 PIGPP57054 158 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 MAXP61244 160 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 ERVK-16P61578 105 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 RPS23P62266 143 aaKnown RBP2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 SELENOTP62341 195 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 RPS28P62857 69 aaKnown RBP2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 JOSD1Q15040 202 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 MESTQ5EB52 335 aa2.8□□□□□ -1.96
HMGB1P12-201ENST00000438594 TNFAIP8L3Q5GJ75 292 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms