RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 S100PBPQ96BU1 408 aa10.37□□□□□ -0.75
CLDN4-203ENST00000435050 MOB3AQ96BX8 217 aa10.37□□□□□ -0.75
CLDN4-203ENST00000435050 ABHD17AQ96GS6 310 aa10.37□□□□□ -0.75
CLDN4-203ENST00000435050 LIME1Q9H400 295 aa10.37□□□□□ -0.75
CLDN4-203ENST00000435050 ATP23Q9Y6H3 246 aa10.37□□□□□ -0.75
CLDN4-203ENST00000435050 MED12LQ86YW9 2145 aa10.37□□□□□ -0.75
CLDN4-203ENST00000435050 COL5A1P20908 1838 aaPredicted RBP10.37□□□□□ -0.75
CLDN4-203ENST00000435050 MED13LQ71F56 2210 aa10.37□□□□□ -0.75
CLDN4-203ENST00000435050 AQP7O14520 342 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 FAM27E3Q08E93 113 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 BTNL3Q6UXE8 466 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 LHFPL1Q86WI0 220 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 PPP1R35Q8TAP8 253 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 GLYATL2Q8WU03 294 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 GALMQ96C23 342 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 TLN1Q9Y490 2541 aaKnown RBP10.36□□□□□ -0.75
CLDN4-203ENST00000435050 CPAMD8Q8IZJ3 1885 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 MSTNO14793 375 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 SS18L1O75177 396 aaPredicted RBP10.36□□□□□ -0.75
CLDN4-203ENST00000435050 HLA-DRB3P79483 266 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 TMEM182Q6ZP80 229 aaPredicted RBP10.36□□□□□ -0.75
CLDN4-203ENST00000435050 Q6ZRG5 221 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 GLRX5Q86SX6 157 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 MOGAT3Q86VF5 341 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 Q8IYB0 196 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 CXXC4Q9H2H0 198 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 PLEKHF2Q9H8W4 249 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 IGKV1D-13A0A0B4J2D9 117 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 ATP6V1G2-DDX39BF2Z307 99 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 M0R036 132 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 IGKV1-13P0DP09 117 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 CD37P11049 281 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 PPT1P50897 306 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 SMIM21Q3B7S5 101 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 KRBOX4Q5JUW0 171 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 SCGB1C1Q8TD33 95 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 LRFN3Q9BTN0 628 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 FAM96BQ9Y3D0 163 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 NCKAP5O14513 1909 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 TMEM30CPA0ZSE6 113 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 H7C1Q1 480 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 IFNA5P01569 189 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 NHLH2Q02577 135 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 COLCA1Q6ZS62 124 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 RNF126Q9BV68 326 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 SCNM1Q9BWG6 230 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 FAM117AQ9C073 453 aa10.36□□□□□ -0.75
CLDN4-203ENST00000435050 PROB1E7EW31 1015 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 K7EM74 188 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 CA11O75493 328 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 CLDN1O95832 211 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 MBPP02686 304 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-203ENST00000435050 OR8G2PQ6IF36 304 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 OR2D2Q9H210 308 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 TMED3Q9Y3Q3 217 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 KRBOX1C9JBD0 128 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 PSG2P11465 335 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 CD80P33681 288 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 RPL23AP62750 156 aaKnown RBP10.35□□□□□ -0.75
CLDN4-203ENST00000435050 FAM201AQ5SY85 155 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 POC1AQ8NBT0 407 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 LILRB1Q8NHL6 650 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-203ENST00000435050 SSC4DQ8WTU2 575 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 DYNLRB1Q9NP97 96 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 CLCF1Q9UBD9 225 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 TP53TG5Q9Y2B4 290 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 RAB19A4D1S5 217 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 SPINT2O43291 252 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 TNFSF4P23510 183 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 KLF3P57682 345 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-203ENST00000435050 CXorf66Q5JRM2 361 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-203ENST00000435050 SPANXN5Q5MJ07 72 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 OR1L1Q8NH94 360 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 FGF23Q9GZV9 251 aaPredicted RBP10.35□□□□□ -0.75
CLDN4-203ENST00000435050 IL36GQ9NZH8 169 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 PSG11Q9UQ72 335 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 OR2W1Q9Y3N9 320 aa10.35□□□□□ -0.75
CLDN4-203ENST00000435050 ATRXP46100 2492 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 SMCO3A2RU48 225 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 OR5H1A6NKK0 313 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 JTBO76095 146 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 HEXAP06865 529 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 NDUFB7P17568 137 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 TMEM187Q14656 261 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 TUSC1Q2TAM9 212 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 SPINK9Q5DT21 86 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 C1orf185Q5T7R7 199 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 OR8G5Q8NG78 346 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 OR52L2PQ8NGH6 319 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 TRAV24A0A0B4J272 114 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 VSTM5A8MXK1 200 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 PPP1CCP36873 323 aaKnown RBP10.34□□□□□ -0.75
CLDN4-203ENST00000435050 MZT1Q08AG7 82 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 ZNF345Q14585 488 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 PXDC1Q5TGL8 231 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 CLCC1Q96S66 551 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 SLC25A31Q9H0C2 315 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 OR51I2Q9H344 312 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 PLEKHA2Q9HB19 425 aa10.34□□□□□ -0.75
CLDN4-203ENST00000435050 FAM212BQ9NTI7 297 aaPredicted RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms