RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 OR5AP2Q8NGF4 316 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 SDSLQ96GA7 329 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 SNX22Q96L94 193 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 SLC6A7Q99884 636 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 MARVELD1Q9BSK0 173 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 ZNF665Q9H7R5 613 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 NUDT15Q9NV35 164 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 EHFQ9NZC4 300 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 SCP2D1Q9UJQ7 156 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 MGAT4AQ9UM21 535 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 PPIAL4AQ9Y536 164 aa9.4□□□□□ -0.9
LINC00539-203ENST00000434601 CR1P17927 2039 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 TRAV6A0A075B6T7 132 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 KIR2DS1A0A191URI9 304 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 NDUFB6O95139 128 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 H2AFB2P0C5Z0 115 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 KIR2DS4P43632 304 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 MRPS11P82912 194 aaKnown RBP9.39□□□□□ -0.91
LINC00539-203ENST00000434601 PAX5Q02548 391 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 KIR2DS1Q14954 304 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 SCGB2B2Q4G0G5 96 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 ZNF788Q6ZQV5 615 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 TMEM17Q86X19 198 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 ZNF561Q8N587 486 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 DEFB108BQ8NET1 73 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 COQ2Q96H96 371 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 GAFA1Q96PS6 74 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 GINS4Q9BRT9 223 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 SHARPINQ9H0F6 387 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 DNTTIP1Q9H147 329 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 MYOZ1Q9NP98 299 aaPredicted RBP9.39□□□□□ -0.91
LINC00539-203ENST00000434601 NECAP2Q9NVZ3 263 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 ING3Q9NXR8 418 aa9.39□□□□□ -0.91
LINC00539-203ENST00000434601 TRDCB7Z8K6 153 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 INMT-MINDY4F8WBC2 141 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 K7N7A8 449 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 SDCBPO00560 298 aaPredicted RBP9.38□□□□□ -0.91
LINC00539-203ENST00000434601 MGST3O14880 152 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 ARPC1BO15143 372 aaKnown RBP9.38□□□□□ -0.91
LINC00539-203ENST00000434601 SIGLEC5O15389 551 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 FABP7O15540 132 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 RP2O75695 350 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 GSTT2P0CG29 244 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 RAG2P55895 527 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 TSPAN5P62079 268 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 BTG1P62324 171 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 AESQ08117 197 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 EDDM3AQ14507 147 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 KCNJ8Q15842 424 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 CLEC12BQ2HXU8 276 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 KRBOX4Q5JUW0 171 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 OVCH2Q7RTZ1 564 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 TMEM185AQ8NFB2 350 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 OR13C8Q8NGS7 320 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 CCDC107Q8WV48 283 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 SLC25A21Q9BQT8 299 aaPredicted RBP9.38□□□□□ -0.91
LINC00539-203ENST00000434601 FAM234AQ9H0X4 552 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 MBNL3Q9NUK0 354 aaKnown RBP9.38□□□□□ -0.91
LINC00539-203ENST00000434601 KIF25Q9UIL4 384 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 TRAPPC2LQ9UL33 140 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 MAB21L2Q9Y586 359 aa9.38□□□□□ -0.91
LINC00539-203ENST00000434601 MEIKINA0A087WXM9 373 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 A0A1B0GW55 424 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 LYNX1G3V0Z9 82 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 OVOL3O00110 214 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 PEX14O75381 377 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 FSTL3O95633 263 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 DHFRP00374 187 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 IFNA2P01563 188 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 TK1P04183 234 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 DUX4L2P0CJ85 424 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 DUX4L3P0CJ86 424 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 DUX4L4P0CJ87 422 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 DUX4L5P0CJ88 424 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 DUX4L6P0CJ89 424 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 DUX4L7P0CJ90 424 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 OR5H8P0DN80 308 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 LYNX1P0DP58 116 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 SELLP14151 372 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 DAOP14920 347 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 RCC1P18754 421 aaPredicted RBP9.37□□□□□ -0.91
LINC00539-203ENST00000434601 COL8A2P25067 703 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 CDKN1AP38936 164 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 GLP1RP43220 463 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 IL13RA1P78552 427 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 HMGN3Q15651 99 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 TATDN3Q17R31 274 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 ATPAF1Q5TC12 328 aaPredicted RBP9.37□□□□□ -0.91
LINC00539-203ENST00000434601 DUX4L9Q6RFH8 374 aaPredicted RBP9.37□□□□□ -0.91
LINC00539-203ENST00000434601 SLC36A1Q7Z2H8 476 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 LHFPL1Q86WI0 220 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 FAM216BQ8N7L0 139 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 ZNRF1Q8ND25 227 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 OR5D13Q8NGL4 314 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 OR4A4PQ8NGN8 299 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 CCL13Q99616 98 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 CABLES2Q9BTV7 478 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 DUX4Q9UBX2 424 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 FLVCR2Q9UPI3 526 aa9.37□□□□□ -0.91
LINC00539-203ENST00000434601 TRAV39A0A0B4J263 110 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms