RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 VENTXO95231 258 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 IL1AP01583 271 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 SNRPBP14678 240 aaKnown RBP12.66□□□□□ -0.38
TREX1-201ENST00000433541 GZMHP20718 246 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 SERPINB10P48595 397 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 MIDNQ504T8 468 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 C6orf183Q5T699 404 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 GPR107Q5VW38 600 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 Q6ZTK2 550 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 UBALD1Q8TB05 177 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 ZNF48Q96MX3 618 aaPredicted RBP12.66□□□□□ -0.38
TREX1-201ENST00000433541 NCOR1P1Q9H4R4 102 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 IDI2-AS1Q9NZ38 188 aa12.66□□□□□ -0.38
TREX1-201ENST00000433541 A0A0A6YYD4 124 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 SPINT2O43291 252 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 HOXA3O43365 443 aaPredicted RBP12.65□□□□□ -0.38
TREX1-201ENST00000433541 IGHV3-7P01780 117 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 MT-ND4P03905 459 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 RAB6AP20340 208 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 GNG10P50151 68 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 EFNB2P52799 333 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 VBP1P61758 197 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 PAX5Q02548 391 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 PLA2G7Q13093 441 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 C17orf58Q2M2W7 97 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 HCP5Q6MZN7 132 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 TRAT1Q6PIZ9 186 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 ABHD12Q8N2K0 398 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 LGALS14Q8TCE9 139 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 TMEM158Q8WZ71 300 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 RAB3CQ96E17 227 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 FBLN5Q9UBX5 448 aa12.65□□□□□ -0.38
TREX1-201ENST00000433541 SDCBPO00560 298 aaPredicted RBP12.64□□□□□ -0.39
TREX1-201ENST00000433541 NOL3O60936 208 aaKnown RBP12.64□□□□□ -0.39
TREX1-201ENST00000433541 CFPP27918 469 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 GDNFP39905 211 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 PRRX1P54821 245 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 NCS1P62166 190 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 ACTG1P63261 375 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 PLA1AQ53H76 456 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 BAIAP2L2Q6UXY1 529 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 CROCCP3Q8IVE0 287 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 ZNF596Q8TC21 504 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 SSMEM1Q8WWF3 244 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 ARHGAP5-AS1Q96IT6 56 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 KIRREL1Q96J84 757 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 DPAGT1Q9H3H5 408 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 SCOCQ9UIL1 159 aa12.64□□□□□ -0.39
TREX1-201ENST00000433541 CUBNO60494 3623 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 LDLRAD4O15165 306 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 ORC5O43913 435 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 MELTFP08582 738 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 CD3GP09693 182 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 RCC1P18754 421 aaPredicted RBP12.63□□□□□ -0.39
TREX1-201ENST00000433541 Q6YL49 198 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 LHFPL4Q7Z7J7 247 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 RTN4RL2Q86UN3 420 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 OR11H6Q8NGC7 330 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 OR10R2Q8NGX6 335 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 MRPL30Q8TCC3 161 aaKnown RBP12.63□□□□□ -0.39
TREX1-201ENST00000433541 LEAP2Q969E1 77 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 CYYR1Q96J86 154 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 CMSS1Q9BQ75 279 aaKnown RBP12.63□□□□□ -0.39
TREX1-201ENST00000433541 PECRQ9BY49 303 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 ZNF286AQ9HBT8 521 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 ESM1Q9NQ30 184 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 ABRACLQ9P1F3 81 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 GNG12Q9UBI6 72 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 AK3Q9UIJ7 227 aa12.63□□□□□ -0.39
TREX1-201ENST00000433541 TBL2Q9Y4P3 447 aaKnown RBP12.63□□□□□ -0.39
TREX1-201ENST00000433541 IGHV3-43A0A0B4J1X8 118 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 IGHV3-43DP0DP04 118 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 HTR1DP28221 377 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 RPS19P39019 145 aaKnown RBP12.62□□□□□ -0.39
TREX1-201ENST00000433541 UBA52P62987 128 aaKnown RBP12.62□□□□□ -0.39
TREX1-201ENST00000433541 ARFRP1Q13795 201 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 SSX2Q16385 188 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 ZNF626Q68DY1 528 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 FAM89BQ8N5H3 189 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 ZDHHC22Q8N966 263 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 OR10A7Q8NGE5 316 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 C17orf50Q8WW18 174 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 PTX4Q96A99 478 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 NAA50Q9GZZ1 169 aaKnown RBP12.62□□□□□ -0.39
TREX1-201ENST00000433541 ZMAT3Q9HA38 289 aaKnown RBP12.62□□□□□ -0.39
TREX1-201ENST00000433541 TAF9BQ9HBM6 251 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 C12orf4Q9NQ89 552 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 ABCB10Q9NRK6 738 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 ZNRD1Q9P1U0 126 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 HSF4Q9ULV5 492 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 HILPDAQ9Y5L2 63 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 ATRQ13535 2644 aa12.62□□□□□ -0.39
TREX1-201ENST00000433541 ODF3BA8MYP8 253 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 C12orf77C9JDV5 145 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 SCGNO76038 276 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 IGHV4-59P01825 116 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 HBZP02008 142 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 TFAP2AP05549 437 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 CRYBA1P05813 215 aa12.61□□□□□ -0.39
TREX1-201ENST00000433541 GNB3P16520 340 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms