RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 DCSTAMPQ9H295 470 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 FBXL15Q9H469 300 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 RPF2Q9H7B2 306 aaKnown RBP1.89□□□□□ -2.11
CLK1-204ENST00000432425 REEP1Q9H902 201 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 LRTM1Q9HBL6 345 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 NIT2Q9NQR4 276 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 IDI2-AS1Q9NZ38 188 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 CES1P1Q9UKY3 287 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 PKIGQ9Y2B9 76 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 SIGLEC9Q9Y336 463 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 RPL36Q9Y3U8 105 aaKnown RBP1.89□□□□□ -2.11
CLK1-204ENST00000432425 WRNQ14191 1432 aaPredicted RBP eCLIP1.89□□□□□ -2.11
CLK1-204ENST00000432425 SETD5Q9C0A6 1442 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 RIMS2Q9UQ26 1411 aa1.89□□□□□ -2.11
CLK1-204ENST00000432425 ZNF106Q9H2Y7 1883 aaKnown RBP1.88□□□□□ -2.11
CLK1-204ENST00000432425 SCN10AQ9Y5Y9 1956 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 DOCK9Q9BZ29 2069 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 A0A096LNJ9 63 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 IGHV3-64DA0A0J9YX35 117 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 OR4C46A6NHA9 309 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 BTNL10A8MVZ5 291 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 G3V2T6 193 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 M0R1B8 84 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 RGS5O15539 181 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 FABP7O15540 132 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 CRXO43186 299 aaPredicted RBP1.88□□□□□ -2.11
CLK1-204ENST00000432425 TCF21O43680 179 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 MGRN1O60291 552 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 UGT2B11O75310 529 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 FKBP6O75344 327 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 S100A8P05109 93 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 CSF3P09919 207 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 ZNF806P0C7X5 589 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 OR13C7P0DN81 318 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 GABRA1P14867 456 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 MUC1P15941 1255 aaPredicted RBP1.88□□□□□ -2.11
CLK1-204ENST00000432425 GPX2P18283 190 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 IL1RNP18510 177 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 SDC4P31431 198 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 HRH1P35367 487 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 GLRXP35754 106 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 TFPI2P48307 235 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 SSR4P51571 173 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 RRAS2P62070 204 aaPredicted RBP1.88□□□□□ -2.11
CLK1-204ENST00000432425 PPP1CBP62140 327 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 ECH1Q13011 328 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 GNMTQ14749 295 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 RSU1Q15404 277 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 KCNJ8Q15842 424 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 NEDD8Q15843 81 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 PRSS8Q16651 343 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 LRRC26Q2I0M4 334 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 CEACAM21Q3KPI0 293 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 CASC10Q5T4H9 136 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 TMEM78Q5T7P6 136 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 HIST2H3PS2Q5TEC6 136 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 WDR82Q6UXN9 313 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 ACP7Q6ZNF0 438 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 TMPPEQ6ZT21 453 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 FAM231DQ6ZW35 169 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 TCF24Q7RTU0 167 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 DOLPP1Q86YN1 238 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 RAB43Q86YS6 212 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 SPICQ8N5J4 248 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 OR4K15Q8NH41 348 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 OR13C6PQ8NH95 151 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 DOK4Q8TEW6 326 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 ASB13Q8WXK3 278 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 ACOT12Q8WYK0 555 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 FGF11Q92914 225 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 LRRC58Q96CX6 371 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 BTF3L4Q96K17 158 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 OR52B2Q96RD2 323 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 RARRES2Q99969 163 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 ZNF442Q9H7R0 627 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 DHCR7Q9UBM7 475 aaKnown RBP1.88□□□□□ -2.11
CLK1-204ENST00000432425 MMP17Q9ULZ9 603 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 ING4Q9UNL4 249 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.88□□□□□ -2.11
CLK1-204ENST00000432425 SNX10Q9Y5X0 201 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 UBIAD1Q9Y5Z9 338 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 NALCNQ8IZF0 1738 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 DOCK6Q96HP0 2047 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 PALLDQ8WX93 1383 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 SLIT3O75094 1523 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 NCKAP5O14513 1909 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 COL22A1Q8NFW1 1626 aaPredicted RBP1.88□□□□□ -2.11
CLK1-204ENST00000432425 A2MP01023 1474 aa1.88□□□□□ -2.11
CLK1-204ENST00000432425 FAM240AA0A1B0GVK7 77 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 A0A1W2PRE2 83 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 MAP1LC3B2A6NCE7 125 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 OR5H14A6NHG9 310 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 F5H5K5 113 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 F6UB75 175 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 SLC22A1O15245 554 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 HMGB3O15347 200 aaKnown RBP1.87□□□□□ -2.11
CLK1-204ENST00000432425 GYG2O15488 501 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 CHST10O43529 356 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 SOX15O60248 233 aa1.87□□□□□ -2.11
CLK1-204ENST00000432425 IGKV1D-16P01601 117 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms