RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 TAAR3PQ9P1P4 343 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 OR1A1Q9P1Q5 309 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 PCNX1Q96RV3 2341 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 GPR31O00270 319 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 LYL1P12980 280 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 UBA52P62987 128 aaKnown RBP16.48■□□□□ 0.23
VRK2-205ENST00000432057 MZT1Q08AG7 82 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 LYZL2Q7Z4W2 148 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 H1FOOQ8IZA3 346 aaPredicted RBP16.48■□□□□ 0.23
VRK2-205ENST00000432057 FAM185AQ8N0U4 392 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 PRR18Q8N4B5 295 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 LRTM2Q8N967 370 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 C18orf12Q96KH6 178 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 GLS2Q9UI32 602 aa16.48■□□□□ 0.23
VRK2-205ENST00000432057 ARID1AO14497 2285 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 C3orf85A0A1B0GTC6 90 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 CD40P25942 277 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 RAB14P61106 215 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 RND3P61587 244 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 SMIM21Q3B7S5 101 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 SPRNQ5BIV9 151 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 MEX3BQ6ZN04 569 aaKnown RBP16.47■□□□□ 0.23
VRK2-205ENST00000432057 FOXRED2Q8IWF2 684 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 SCARB1Q8WTV0 552 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 ST8SIA2Q92186 375 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 GSX2Q9BZM3 304 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 ELOVL5Q9NYP7 299 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 PLCE1Q9P212 2302 aa16.47■□□□□ 0.23
VRK2-205ENST00000432057 C16orf97H3BN30 126 aa16.46■□□□□ 0.23
VRK2-205ENST00000432057 RLN2P04090 185 aa16.46■□□□□ 0.23
VRK2-205ENST00000432057 EGR1P18146 543 aa16.46■□□□□ 0.23
VRK2-205ENST00000432057 LMO1P25800 156 aa16.46■□□□□ 0.23
VRK2-205ENST00000432057 LGI3Q8N145 548 aa16.46■□□□□ 0.23
VRK2-205ENST00000432057 OR1S1Q8NH92 325 aa16.46■□□□□ 0.23
VRK2-205ENST00000432057 MRPL37Q9BZE1 423 aaKnown RBP16.46■□□□□ 0.23
VRK2-205ENST00000432057 MBNL3Q9NUK0 354 aaKnown RBP16.46■□□□□ 0.23
VRK2-205ENST00000432057 JKAMPQ9P055 326 aa16.46■□□□□ 0.23
VRK2-205ENST00000432057 METRNQ9UJH8 293 aa16.46■□□□□ 0.23
VRK2-205ENST00000432057 OR2W1Q9Y3N9 320 aa16.46■□□□□ 0.23
VRK2-205ENST00000432057 WIPI2Q9Y4P8 454 aa16.46■□□□□ 0.23
VRK2-205ENST00000432057 RAI1Q7Z5J4 1906 aaPredicted RBP16.46■□□□□ 0.23
VRK2-205ENST00000432057 IGLV3-9A0A075B6K5 115 aa16.46■□□□□ 0.22
VRK2-205ENST00000432057 MSGN1A6NI15 193 aa16.46■□□□□ 0.22
VRK2-205ENST00000432057 POM121CA8CG34 1229 aa16.46■□□□□ 0.22
VRK2-205ENST00000432057 LUMP51884 338 aaPredicted RBP16.46■□□□□ 0.22
VRK2-205ENST00000432057 RPS23P62266 143 aaKnown RBP16.46■□□□□ 0.22
VRK2-205ENST00000432057 RBPJQ06330 500 aa16.46■□□□□ 0.22
VRK2-205ENST00000432057 HMGN3Q15651 99 aa16.46■□□□□ 0.22
VRK2-205ENST00000432057 WFDC8Q8IUA0 241 aa16.46■□□□□ 0.22
VRK2-205ENST00000432057 OR2V2Q96R30 315 aa16.46■□□□□ 0.22
VRK2-205ENST00000432057 TUBD1Q9UJT1 453 aa16.46■□□□□ 0.22
VRK2-205ENST00000432057 FBXO9Q9UK97 447 aaPredicted RBP16.46■□□□□ 0.22
VRK2-205ENST00000432057 TMEM30CPA0ZSE6 113 aa16.45■□□□□ 0.22
VRK2-205ENST00000432057 LEUTXA8MZ59 168 aa16.45■□□□□ 0.22
VRK2-205ENST00000432057 NPIPB11E5RHQ5 1161 aa16.45■□□□□ 0.22
VRK2-205ENST00000432057 SPRY3O43610 288 aa16.45■□□□□ 0.22
VRK2-205ENST00000432057 PET100P0DJ07 73 aa16.45■□□□□ 0.22
VRK2-205ENST00000432057 PRR7Q8TB68 274 aa16.45■□□□□ 0.22
VRK2-205ENST00000432057 ZNF471Q9BX82 626 aaPredicted RBP16.45■□□□□ 0.22
VRK2-205ENST00000432057 TMEM222Q9H0R3 208 aa16.45■□□□□ 0.22
VRK2-205ENST00000432057 ERRFI1Q9UJM3 462 aaPredicted RBP16.45■□□□□ 0.22
VRK2-205ENST00000432057 TUBAL3A6NHL2 446 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 OR3A1P47881 315 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 COL10A1Q03692 680 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 C1QTNF12Q5T7M4 302 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 TMEM268Q5VZI3 342 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 SLC35G3Q8N808 338 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 MEGF10Q96KG7 1140 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 CNTNAP3BQ96NU0 1288 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 ARPC5LQ9BPX5 153 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 CNTNAP3Q9BZ76 1288 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 TAF9BQ9HBM6 251 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 KIF25Q9UIL4 384 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 AUP1Q9Y679 476 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 TNFSF12O43508 249 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 SCGB1D2O95969 90 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 AESQ08117 197 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 BOLLQ8N9W6 283 aaKnown RBP16.44■□□□□ 0.22
VRK2-205ENST00000432057 COQ2Q96H96 371 aa16.44■□□□□ 0.22
VRK2-205ENST00000432057 UBE2J1Q9Y385 318 aaPredicted RBP16.44■□□□□ 0.22
VRK2-205ENST00000432057 LSM5Q9Y4Y9 91 aaKnown RBP16.44■□□□□ 0.22
VRK2-205ENST00000432057 ICE1Q9Y2F5 2266 aa16.43■□□□□ 0.22
VRK2-205ENST00000432057 SRRM5B3KS81 715 aa16.43■□□□□ 0.22
VRK2-205ENST00000432057 F5H0A9 414 aaPredicted RBP16.43■□□□□ 0.22
VRK2-205ENST00000432057 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.43■□□□□ 0.22
VRK2-205ENST00000432057 THBDP07204 575 aa16.43■□□□□ 0.22
VRK2-205ENST00000432057 MOGAT3Q86VF5 341 aa16.43■□□□□ 0.22
VRK2-205ENST00000432057 CD177Q8N6Q3 437 aa16.43■□□□□ 0.22
VRK2-205ENST00000432057 ITLN1Q8WWA0 313 aa16.43■□□□□ 0.22
VRK2-205ENST00000432057 USB1Q9BQ65 265 aaKnown RBP16.43■□□□□ 0.22
VRK2-205ENST00000432057 CACNA1DQ01668 2161 aa16.43■□□□□ 0.22
VRK2-205ENST00000432057 IFNL4K9M1U5 179 aa16.42■□□□□ 0.22
VRK2-205ENST00000432057 HSPA12AO43301 675 aa16.42■□□□□ 0.22
VRK2-205ENST00000432057 NUP62P37198 522 aaPredicted RBP16.42■□□□□ 0.22
VRK2-205ENST00000432057 SRPXP78539 464 aa16.42■□□□□ 0.22
VRK2-205ENST00000432057 TESK1Q15569 626 aa16.42■□□□□ 0.22
VRK2-205ENST00000432057 SLC35E4Q6ICL7 350 aa16.42■□□□□ 0.22
VRK2-205ENST00000432057 TMEM108Q6UXF1 575 aa16.42■□□□□ 0.22
VRK2-205ENST00000432057 COMMD7Q86VX2 200 aa16.42■□□□□ 0.22
VRK2-205ENST00000432057 CMTM1Q8IZ96 169 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms