RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 SPIN2BQ9BPZ2 258 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 NRIP2Q9BQI9 281 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 CXXC4Q9H2H0 198 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 PIGMQ9H3S5 423 aa10.89□□□□□ -0.67
DDX56-204ENST00000431640 PURGQ9UJV8 347 aaKnown RBP10.89□□□□□ -0.67
DDX56-204ENST00000431640 RELNP78509 3460 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 CFAP46Q8IYW2 2715 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 MSGN1A6NI15 193 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 NPIPB11E5RHQ5 1161 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 HSPB6O14558 160 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 ST8SIA3O43173 380 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 KCNAB3O43448 404 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 TNFSF13O75888 250 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 NXPH2O95156 264 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 IGLV1-44P01699 117 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 GAPDHP04406 335 aaKnown RBP10.88□□□□□ -0.67
DDX56-204ENST00000431640 HOXD4P09016 255 aaPredicted RBP10.88□□□□□ -0.67
DDX56-204ENST00000431640 GCH1P30793 250 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 FOXF2Q12947 444 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 KRTCAP3Q53RY4 240 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 FAM74A1Q5RGS3 127 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 C1QTNF12Q5T7M4 302 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 UQCC3Q6UW78 93 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 BHLHA15Q7RTS1 189 aaPredicted RBP10.88□□□□□ -0.67
DDX56-204ENST00000431640 TBC1D26Q86UD7 250 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 CXorf67Q86X51 503 aaPredicted RBP10.88□□□□□ -0.67
DDX56-204ENST00000431640 ZNF695Q8IW36 515 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 FOXRED2Q8IWF2 684 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 OR11L1Q8NGX0 322 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 IL22RA2Q969J5 263 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 MARC2Q969Z3 335 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 CABLES2Q9BTV7 478 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 BARX1Q9HBU1 254 aaPredicted RBP10.88□□□□□ -0.67
DDX56-204ENST00000431640 TAS2R3Q9NYW6 316 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 OR2W1Q9Y3N9 320 aa10.88□□□□□ -0.67
DDX56-204ENST00000431640 LSM5Q9Y4Y9 91 aaKnown RBP10.88□□□□□ -0.67
DDX56-204ENST00000431640 RAB19A4D1S5 217 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 OR5H1A6NKK0 313 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 TEX46H3BTG2 121 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 CDIPTO14735 213 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 AGFG2O95081 481 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 MBPP02686 304 aaPredicted RBP10.87□□□□□ -0.67
DDX56-204ENST00000431640 P2RY1P47900 373 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 ERVS71-1P61550 626 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 ZNF154Q13106 437 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 HERPUD1Q15011 391 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 TMEM268Q5VZI3 342 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 SEM1Q6ZVN7 128 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 WDR86Q86TI4 376 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 GAPTQ8N292 157 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 STPG2Q8N412 459 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 SAT2Q96F10 170 aaPredicted RBP10.87□□□□□ -0.67
DDX56-204ENST00000431640 ABHD14BQ96IU4 210 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 TP53RKQ96S44 253 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 C1QTNF6Q9BXI9 259 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 FAM215AQ9Y5M1 114 aa10.87□□□□□ -0.67
DDX56-204ENST00000431640 IGKV1-6A0A0C4DH72 117 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 SLC33A1O00400 549 aaPredicted RBP10.86□□□□□ -0.67
DDX56-204ENST00000431640 GPR137BO60478 399 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 OR2H2O95918 312 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 SCGB1D2O95969 90 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 GRPP07492 148 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 WNT2P09544 360 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 CECR9P0C854 216 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 GNMTQ14749 295 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 C3orf36Q3SXR2 165 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 MBNL2Q5VZF2 373 aaKnown RBP10.86□□□□□ -0.67
DDX56-204ENST00000431640 ZNF497Q6ZNH5 498 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 C20orf204Q6ZNR8 217 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 ZNF818PQ6ZRF7 136 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 H1FOOQ8IZA3 346 aaPredicted RBP10.86□□□□□ -0.67
DDX56-204ENST00000431640 LILRB1Q8NHL6 650 aaPredicted RBP10.86□□□□□ -0.67
DDX56-204ENST00000431640 AKR1E2Q96JD6 320 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 TAF9BQ9HBM6 251 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 TRAPPC2LQ9UL33 140 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 WIPI2Q9Y4P8 454 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 SVILO95425 2214 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 TIMM8AO60220 97 aaPredicted RBP10.86□□□□□ -0.67
DDX56-204ENST00000431640 PVALBP20472 110 aaPredicted RBP10.86□□□□□ -0.67
DDX56-204ENST00000431640 LMO1P25800 156 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 UCP1P25874 307 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 TIMP3P35625 211 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 MPV17P39210 176 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 ALKBH6Q3KRA9 238 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 MEX3BQ6ZN04 569 aaKnown RBP10.86□□□□□ -0.67
DDX56-204ENST00000431640 SELENOHQ8IZQ5 122 aaKnown RBP10.86□□□□□ -0.67
DDX56-204ENST00000431640 SLC35G3Q8N808 338 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 OR5D13Q8NGL4 314 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 OPN3Q9H1Y3 402 aaPredicted RBP10.86□□□□□ -0.67
DDX56-204ENST00000431640 HES4Q9HCC6 221 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 CCL28Q9NRJ3 127 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 TAAR3PQ9P1P4 343 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 SPEF1Q9Y4P9 236 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 POMT1Q9Y6A1 747 aa10.86□□□□□ -0.67
DDX56-204ENST00000431640 ZFYVE26Q68DK2 2539 aa10.85□□□□□ -0.67
DDX56-204ENST00000431640 DOCK7Q96N67 2140 aa10.85□□□□□ -0.67
DDX56-204ENST00000431640 BORCS7-ASMTA0A0B4J1R7 106 aa10.85□□□□□ -0.67
DDX56-204ENST00000431640 CLEC18AA5D8T8 446 aa10.85□□□□□ -0.67
DDX56-204ENST00000431640 H0Y980 276 aa10.85□□□□□ -0.67
DDX56-204ENST00000431640 SIRPB1O00241 398 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms