RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 CST2P09228 141 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 TCN2P20062 427 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 CXCL12P48061 93 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 ARF1P84077 181 aaKnown RBP6.12□□□□□ -1.43
COL28A1-202ENST00000430711 PRDX4Q13162 271 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 PYY3Q5JQD4 70 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 C9orf152Q5JTZ5 239 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 LYSMD4Q5XG99 296 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 ABLIM2Q6H8Q1 611 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 PCSK4Q6UW60 755 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 HEPN1Q6WQI6 88 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 LGI3Q8N145 548 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF565Q8N9K5 539 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 OR51H1Q8NH63 302 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 RDH5Q92781 318 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 TAAR9Q96RI9 348 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 SYT3Q9BQG1 590 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 SLC35B3Q9H1N7 401 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 BCO1Q9HAY6 547 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF286AQ9HBT8 521 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 KCNIP3Q9Y2W7 256 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 RNF115Q9Y4L5 304 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 ADGRG4Q8IZF6 3080 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 USF3Q68DE3 2245 aa6.12□□□□□ -1.43
COL28A1-202ENST00000430711 A0A1W2PNU3 283 aaPredicted RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 C5orf49A4QMS7 147 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 HMGB3O15347 200 aaKnown RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 CHST1O43916 411 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 NAPSAO96009 420 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 IFNA4P05014 189 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 CD55P08174 381 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 RAC3P60763 192 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 ZFP36L1Q07352 338 aaKnown RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 CNN3Q15417 329 aaKnown RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 PRSS8Q16651 343 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 C4orf48Q5BLP8 95 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 LHFPL2Q6ZUX7 228 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 TUSC5Q8IXB3 177 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 PRR18Q8N4B5 295 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 SUCNR1Q9BXA5 334 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 Q9N2K0 584 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 LUZP4Q9P127 313 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 C19orf25Q9UFG5 118 aaPredicted RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 TINAGQ9UJW2 476 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 TNRC6AQ8NDV7 1962 aaKnown RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 RBFOX3A6NFN3 312 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 EIF1BO60739 113 aaKnown RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 OR2C1O95371 312 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 IGHV2-70P01814 119 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 IAPPP10997 89 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 PSG2P11465 335 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 FUT3P21217 361 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 PAX6P26367 422 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 GLP1RP43220 463 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 NKX2-1P43699 371 aaPredicted RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 CEBPDP49716 269 aaPredicted RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 HERV-K104P61576 105 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 FOXO1Q12778 655 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 MALLQ13021 153 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 ELOBQ15370 118 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 EXT1Q16394 746 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 EIF5AL1Q6IS14 154 aaKnown RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 BEND4Q6ZU67 534 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 WDR86Q86TI4 376 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 OR2Y1Q8NGV0 311 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 PCED1AQ9H1Q7 454 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF665Q9H7R5 613 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 LYRM2Q9NU23 88 aaPredicted RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 PLA2G3Q9NZ20 509 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 PILRBQ9UKJ0 227 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 UBE2J1Q9Y385 318 aaPredicted RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 ANKRD11Q6UB99 2663 aaPredicted RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 ASH1LQ9NR48 2969 aaKnown RBP6.11□□□□□ -1.43
COL28A1-202ENST00000430711 UNC79Q9P2D8 2635 aa6.11□□□□□ -1.43
COL28A1-202ENST00000430711 A0A087WZY1 265 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 TRAV24A0A0B4J272 114 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF816-ZNF321PA0A0X1KG74 233 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 FAM166BA8MTA8 275 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF732B4DXR9 585 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 RPL36A-HNRNPH2H7BZ11 118 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 WRBO00258 174 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 CBR3O75828 277 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 LY86O95711 162 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 SOD3P08294 240 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 GDF1P27539 372 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 RPS10P46783 165 aaKnown RBP6.1□□□□□ -1.43
COL28A1-202ENST00000430711 GFRA1P56159 465 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 ERVS71-1P61550 626 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 DLK1P80370 383 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 IL13RA2Q14627 380 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 MPV17LQ2QL34 196 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 ALKBH6Q3KRA9 238 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 C4orf17Q53FE4 359 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 FAM180AQ6UWF9 173 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 DPPA2Q7Z7J5 298 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 ZNF100Q8IYN0 542 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 KDF1Q8NAX2 398 aaPredicted RBP6.1□□□□□ -1.43
COL28A1-202ENST00000430711 SUMF2Q8NBJ7 301 aa6.1□□□□□ -1.43
COL28A1-202ENST00000430711 MRPL30Q8TCC3 161 aaKnown RBP6.1□□□□□ -1.43
COL28A1-202ENST00000430711 CPT1CQ8TCG5 803 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms