RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 TUBD1Q9UJT1 453 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 THADAQ6YHU6 1953 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 PDGFBP01127 241 aaPredicted RBP11.87□□□□□ -0.51
SGMS1-203ENST00000429490 CA6P23280 308 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 TMEM41BQ5BJD5 291 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 FAM27BQ5VT28 67 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 ZNF705AQ6ZN79 300 aaPredicted RBP11.87□□□□□ -0.51
SGMS1-203ENST00000429490 CLDN23Q96B33 292 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 PLA2G2EQ9NZK7 142 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 XKRY2A2RUG3 117 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 YKT6O15498 198 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 IGHV3-13P01766 116 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 IGHV3-7P01780 117 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 CXCL1P09341 107 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 CYB561P49447 251 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 TGFBR3Q03167 851 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 IFI44Q8TCB0 444 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 ATP5SQ99766 215 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 SRXN1Q9BYN0 137 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 TMEM38BQ9NVV0 291 aa11.87□□□□□ -0.51
SGMS1-203ENST00000429490 IGKV1-12A0A0C4DH73 117 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 ZNF737O75373 536 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 IGKV1D-12P01611 117 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 AGAP20933 346 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 FAM185AQ8N0U4 392 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 RFESDQ8TAC1 157 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 OBP2BQ9NPH6 170 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 RPRMQ9NS64 109 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 RIF1Q5UIP0 2472 aaKnown RBP11.86□□□□□ -0.51
SGMS1-203ENST00000429490 IGHV5-10-1A0A0J9YXX1 117 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 NPIPB13A6NJU9 1138 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 NPIPB4C9JG80 1138 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 GABRA2P47869 451 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 RAC3P60763 192 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 PMS2P11Q13670 270 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 EXT1Q16394 746 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 PYY3Q5JQD4 70 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 ZNF468Q5VIY5 522 aaPredicted RBP11.86□□□□□ -0.51
SGMS1-203ENST00000429490 OR2H1Q9GZK4 316 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 PNRC2Q9NPJ4 139 aaKnown RBP11.86□□□□□ -0.51
SGMS1-203ENST00000429490 CFAP54Q96N23 3096 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 PRR14LQ5THK1 2151 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 SYNGR2O43760 224 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 LIFP15018 202 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 EDDM3AQ14507 147 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 IGFBP7Q16270 282 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 C3AR1Q16581 482 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 OR2V1Q8NHB1 315 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 TM2D1Q9BX74 207 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 ZDHHC8Q9ULC8 765 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 USF3Q68DE3 2245 aa11.86□□□□□ -0.51
SGMS1-203ENST00000429490 IGKV1-27A0A075B6S5 117 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 LTBRP36941 435 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 FIP1L1Q6UN15 594 aaKnown RBP11.85□□□□□ -0.51
SGMS1-203ENST00000429490 ZNF600Q6ZNG1 722 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 NFAM1Q8NET5 270 aaPredicted RBP11.85□□□□□ -0.51
SGMS1-203ENST00000429490 ARV1Q9H2C2 271 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 B4GALT7Q9UBV7 327 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 A0A1W2PQM1 296 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 SYNGR1O43759 233 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 PITX3O75364 302 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 SRP19P09132 144 aaKnown RBP11.85□□□□□ -0.51
SGMS1-203ENST00000429490 HOXC12P31275 282 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 ERVFRD-1P60508 538 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 KHDC3LQ587J8 217 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 MSI2Q96DH6 328 aaKnown RBP11.85□□□□□ -0.51
SGMS1-203ENST00000429490 GALNT14Q96FL9 552 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 GCM1Q9NP62 436 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 IGKV1D-13A0A0B4J2D9 117 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 ZNF320A2RRD8 509 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 CTXN2P0C2S0 81 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 IGKV1-13P0DP09 117 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 IL24Q13007 206 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 TMEM211Q6ICI0 200 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 SPINK14Q6IE38 97 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 WDR74Q6RFH5 385 aaPredicted RBP11.85□□□□□ -0.51
SGMS1-203ENST00000429490 ZNF574Q6ZN55 896 aaPredicted RBP11.85□□□□□ -0.51
SGMS1-203ENST00000429490 SELENOHQ8IZQ5 122 aaKnown RBP11.85□□□□□ -0.51
SGMS1-203ENST00000429490 GPR87Q9BY21 358 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 ABI3Q9P2A4 366 aa11.85□□□□□ -0.51
SGMS1-203ENST00000429490 TAS2R30P59541 319 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 SLC38A11Q08AI6 406 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 TMEM241Q24JQ0 296 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 CADM4Q8NFZ8 388 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 TMEM171Q8WVE6 324 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 OR51I2Q9H344 312 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 CDH20Q9HBT6 801 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 LYRM2Q9NU23 88 aaPredicted RBP11.84□□□□□ -0.51
SGMS1-203ENST00000429490 FUT9Q9Y231 359 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 GALR1P47211 349 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 UBE2NP61088 152 aaKnown RBP11.84□□□□□ -0.51
SGMS1-203ENST00000429490 PDLIM3Q53GG5 364 aaPredicted RBP11.84□□□□□ -0.51
SGMS1-203ENST00000429490 ZNF385CQ66K41 422 aaPredicted RBP11.84□□□□□ -0.51
SGMS1-203ENST00000429490 APH1AQ96BI3 265 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 PCNX1Q96RV3 2341 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 SAMD10Q9BYL1 202 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 Q9N2K0 584 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 GLRX2Q9NS18 164 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 PKDREJQ9NTG1 2253 aa11.84□□□□□ -0.51
SGMS1-203ENST00000429490 DEFB108AA8MXU0 73 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms