RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 BRICD5Q6PL45 260 aa12.86□□□□□ -0.35
CLK3P2-201ENST00000427566 TCF23Q7RTU1 214 aa12.86□□□□□ -0.35
CLK3P2-201ENST00000427566 FOXRED1Q96CU9 486 aaPredicted RBP12.86□□□□□ -0.35
CLK3P2-201ENST00000427566 SLC25A38Q96DW6 304 aa12.86□□□□□ -0.35
CLK3P2-201ENST00000427566 S100A16Q96FQ6 103 aaKnown RBP12.86□□□□□ -0.35
CLK3P2-201ENST00000427566 NEDD4LQ96PU5 975 aa12.86□□□□□ -0.35
CLK3P2-201ENST00000427566 TNFRSF19Q9NS68 423 aa12.86□□□□□ -0.35
CLK3P2-201ENST00000427566 TRBV23-1A0A0A0MS06 115 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 A0A1W2PRD5 423 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 A0A1W2PRF3 423 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 A0A1W2PRM7 423 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 DNAJC9-AS1A6NH13 148 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 ZNF780AO75290 641 aaPredicted RBP12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 CRTAPO75718 401 aaPredicted RBP12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 MGMTP16455 207 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 GLIPR1P48060 266 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 UBA52P62987 128 aaKnown RBP12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 AESQ08117 197 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 ATXN7L3Q14CW9 347 aaPredicted RBP12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 DEFB112Q30KQ8 113 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 C11orf42Q8N5U0 333 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 OR5D13Q8NGL4 314 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 COQ2Q96H96 371 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 SELENOIQ9C0D9 397 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 COL6A5A8TX70 2615 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 IGHV1-69DA0A0B4J2H0 117 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 MGST3O14880 152 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 OR7C1O76099 320 aaPredicted RBP12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 IGHV1-69P01742 117 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 RANBP1P43487 201 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 QRFPP83859 136 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 UNC119Q13432 240 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 GPR176Q14439 515 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 RAB11BQ15907 218 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 PLET1Q6UQ28 207 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 SUMF2Q8NBJ7 301 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 CHST4Q8NCG5 386 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 OR6M1Q8NGM8 313 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 PLPPR1Q8TBJ4 325 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 SMIM4Q8WVI0 70 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 Q96M66 194 aa12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 C7orf50Q9BRJ6 194 aaKnown RBP12.85□□□□□ -0.35
CLK3P2-201ENST00000427566 FAM240BA0A1B0GVZ2 78 aa12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 MPIG6BO95866 241 aa12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 DLX6P56179 175 aa12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 PLA2G7Q13093 441 aa12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 KLRD1Q13241 179 aa12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 PAN3Q58A45 887 aaKnown RBP12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 SIGIRRQ6IA17 410 aa12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 C9orf139Q6ZV77 190 aa12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 KIR3DL3Q8N743 410 aa12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 OR51D1Q8NGF3 324 aa12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 FAM216AQ8WUB2 273 aa12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 GCDHQ92947 438 aaPredicted RBP12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 TNFRSF14Q92956 283 aa12.84□□□□□ -0.35
CLK3P2-201ENST00000427566 CENPXA8MT69 81 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 TMEM14DPA8MWL7 114 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 BOLA2-SMG1P6H3BVE0 249 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 GABARAPH6UMI1 98 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 PRTN3P24158 256 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 P2RX3P56373 397 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 BPIFB3P59826 476 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 ATAD3CQ5T2N8 411 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 C12orf54Q6X4T0 127 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 RTN4RL2Q86UN3 420 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 DTX3Q8N9I9 347 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 PPP1R35Q8TAP8 253 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 MRPS24Q96EL2 167 aaKnown RBP12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 DMRTB1Q96MA1 342 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 NICN1Q9BSH3 213 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 DPCDQ9BVM2 203 aaPredicted RBP12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 IFT22Q9H7X7 185 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 PCDHB16Q9NRJ7 776 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 GHRLQ9UBU3 117 aa12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 MRPS7Q9Y2R9 242 aaKnown RBP12.83□□□□□ -0.36
CLK3P2-201ENST00000427566 KIAA2026Q5HYC2 2103 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 A0A0A6YYD4 124 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 RNASEK-C17orf49H0YIS7 233 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 M0R1W7 72 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 HOXA3O43365 443 aaPredicted RBP12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 LANCL1O43813 399 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 BPNT1O95861 308 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 CSN2P05814 226 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 UBBP0CG47 229 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 TRAPPC2P0DI81 140 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 TRAPPC2BP0DI82 140 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 ARSBP15848 533 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 ERP29P30040 261 aaKnown RBP12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 DYRK1AQ13627 763 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 SLC9A3R2Q15599 337 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 MPV17LQ2QL34 196 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 C2orf76Q3KRA6 126 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 KRBOX4Q5JUW0 171 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 TMEM69Q5SWH9 247 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 AKAP14Q86UN6 197 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 TOMM5Q8N4H5 51 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 FAM3DQ96BQ1 224 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 CST11Q9H112 138 aa12.82□□□□□ -0.36
CLK3P2-201ENST00000427566 TRAV39A0A0B4J263 110 aa12.81□□□□□ -0.36
CLK3P2-201ENST00000427566 A0A0U1RQK1 487 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms