RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CDKN2BP42772 138 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 SERPINB10P48595 397 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 NDUFV3P56181 108 aaKnown RBP2.85□□□□□ -1.95
SF3B1-205ENST00000424674 PIGPP57054 158 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 LCN6P62502 163 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 RPS24P62847 133 aaKnown RBP2.85□□□□□ -1.95
SF3B1-205ENST00000424674 RPL36AP83881 106 aaKnown RBP2.85□□□□□ -1.95
SF3B1-205ENST00000424674 RUNX1Q01196 453 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 IFITM3Q01628 133 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 PRDX4Q13162 271 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 FZD2Q14332 565 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 KIAA0087Q14695 138 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 HERPUD1Q15011 391 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 SIX1Q15475 284 aaPredicted RBP2.85□□□□□ -1.95
SF3B1-205ENST00000424674 Q499Y3 187 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 CENPWQ5EE01 88 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 COA6Q5JTJ3 125 aaKnown RBP2.85□□□□□ -1.95
SF3B1-205ENST00000424674 SLC25A30Q5SVS4 291 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 FBXW9Q5XUX1 488 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 LEMD1Q68G75 181 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 AGTRAPQ6RW13 159 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 GSG1LQ6UXU4 331 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 FA2HQ7L5A8 372 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 TMEM179BQ7Z7N9 219 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 NR2C2APQ86WQ0 139 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 SLC22A18ASQ8N1D0 253 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 OSR2Q8N2R0 312 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 NKAPP1Q8N9T2 125 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 ST6GALNAC3Q8NDV1 305 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 OR10G4Q8NGN3 311 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 OR4S2Q8NH73 311 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 OR10G6Q8NH81 332 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF675Q8TD23 568 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 ROPN1LQ96C74 230 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 SMIM8Q96KF7 97 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 RNF157Q96PX1 679 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 PRSS27Q9BQR3 290 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 C19orf24Q9BVV8 132 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 CLEC7AQ9BXN2 247 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 EIF5A2Q9GZV4 153 aaKnown RBP2.85□□□□□ -1.95
SF3B1-205ENST00000424674 PARP12Q9H0J9 701 aaKnown RBP2.85□□□□□ -1.95
SF3B1-205ENST00000424674 VCXQ9H320 206 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 C6orf106Q9H6K1 298 aaPredicted RBP2.85□□□□□ -1.95
SF3B1-205ENST00000424674 SLCO1B3Q9NPD5 702 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 SPHK2Q9NRA0 654 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 PRTFDC1Q9NRG1 225 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 ACER3Q9NUN7 267 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 FAM49BQ9NUQ9 324 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 C14orf105Q9NVL8 296 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 NEU3Q9UQ49 428 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 PSG8Q9UQ74 426 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 PKIGQ9Y2B9 76 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 HDGFL3Q9Y3E1 203 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 DENND4AQ7Z401 1863 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 PTPRJQ12913 1337 aa2.85□□□□□ -1.95
SF3B1-205ENST00000424674 RIMS1Q86UR5 1692 aaKnown RBP2.85□□□□□ -1.95
SF3B1-205ENST00000424674 ARAP1Q96P48 1450 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF608Q9ULD9 1512 aaPredicted RBP2.84□□□□□ -1.95
SF3B1-205ENST00000424674 IGHV1-69DA0A0B4J2H0 117 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 A0A0J9YXV3 536 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 TRAPPC13A5PLN9 417 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 TMEM150BA6NC51 233 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 C8orf87E5RJ46 101 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 H3BP45 60 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 TXNDC9O14530 226 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 CYB5BO43169 146 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 BANF1O75531 89 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 TRBV12-3P01733 135 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 SERPINE1P05121 402 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 SMIM6P0DI80 62 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 LAMP1P11279 417 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 GLRXP35754 106 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 TALDO1P37837 337 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 MDH2P40926 338 aaKnown RBP2.84□□□□□ -1.95
SF3B1-205ENST00000424674 SYNJ2BPP57105 145 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 TAS2R19P59542 299 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 HLA-DRB3P79483 266 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 FABP5Q01469 135 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 FCN2Q15485 313 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 MPPED2Q15777 294 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 RNF212Q495C1 297 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF506Q5JVG8 444 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 C1orf194Q5T5A4 169 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 TMEM236Q5W0B7 351 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 LCN12Q6JVE5 192 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 CXCL17Q6UXB2 119 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF589Q86UQ0 364 aaPredicted RBP2.84□□□□□ -1.95
SF3B1-205ENST00000424674 UMODL1-AS1Q8N2C9 162 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 RFLNBQ8N5W9 214 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 DEFB125Q8N687 156 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 OR4M1Q8NGD0 313 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 OR5A1Q8NGJ0 315 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 OR2G3Q8NGZ4 309 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 ZNF519Q8TB69 540 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 VN1R17PQ8TDU5 208 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 CT55Q8WUE5 264 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 MBD3L1Q8WWY6 194 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 TMEM159Q96B96 161 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 MALSU1Q96EH3 234 aa2.84□□□□□ -1.95
SF3B1-205ENST00000424674 PDXPQ96GD0 296 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms