RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 LINC00574Q9H8X3 128 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 ZFP57Q9NU63 452 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 TAS2R4Q9NYW5 299 aa12.77□□□□□ -0.37
COL18A1-205ENST00000423214 ZMAT5Q9UDW3 170 aaKnown RBP12.77□□□□□ -0.37
COL18A1-205ENST00000423214 SIRT4Q9Y6E7 314 aaPredicted RBP12.77□□□□□ -0.37
COL18A1-205ENST00000423214 NBEAL2Q6ZNJ1 2754 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 NPIPB11E5RHQ5 1161 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 CCRL2O00421 344 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 OR7C1O76099 320 aaPredicted RBP12.76□□□□□ -0.37
COL18A1-205ENST00000423214 LALBAP00709 142 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 CSTBP04080 98 aaKnown RBP12.76□□□□□ -0.37
COL18A1-205ENST00000423214 GNAO1P09471 354 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 MYCNOSP40205 109 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 RAB25P57735 213 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 PPP3R1P63098 170 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 RPL22L1Q6P5R6 122 aaKnown RBP12.76□□□□□ -0.37
COL18A1-205ENST00000423214 TMPRSS11AQ6ZMR5 421 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 SLC16A12Q6ZSM3 486 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 C18orf65Q6ZTR6 163 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 MOB3BQ86TA1 216 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 STPG2Q8N412 459 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 SUMF2Q8NBJ7 301 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 SETD9Q8NE22 299 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 GGHQ92820 318 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 TMEM80Q96HE8 168 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 B9D2Q9BPU9 175 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 C8orf4Q9NR00 106 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 DIMT1Q9UNQ2 313 aaKnown RBP12.76□□□□□ -0.37
COL18A1-205ENST00000423214 DNAH9Q9NYC9 4486 aa12.76□□□□□ -0.37
COL18A1-205ENST00000423214 TRAV39A0A0B4J263 110 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 A0A1W2PPE3 182 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 TMEM30CPA0ZSE6 113 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 IRGMA1A4Y4 181 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 NCBP2LA6PVI3 153 aaKnown RBP12.75□□□□□ -0.37
COL18A1-205ENST00000423214 IGHG2P01859 326 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 GAPDHP04406 335 aaKnown RBP12.75□□□□□ -0.37
COL18A1-205ENST00000423214 MYL12AP19105 171 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 IL3RAP26951 378 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 CAPGP40121 348 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 REG1BP48304 166 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 RBM11P57052 281 aaKnown RBP12.75□□□□□ -0.37
COL18A1-205ENST00000423214 ZNF816Q0VGE8 651 aaPredicted RBP12.75□□□□□ -0.37
COL18A1-205ENST00000423214 OGFRL1Q5TC84 451 aaPredicted RBP12.75□□□□□ -0.37
COL18A1-205ENST00000423214 DDI2Q5TDH0 399 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 ZNF695Q8IW36 515 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 ZFP41Q8N8Y5 198 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 GPR148Q8TDV2 347 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 NEK7Q8TDX7 302 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 ORAI1Q96D31 301 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 METTL9Q9H1A3 318 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 BABAM2Q9NXR7 383 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 ST3GAL6Q9Y274 331 aa12.75□□□□□ -0.37
COL18A1-205ENST00000423214 EXOSC1Q9Y3B2 195 aaKnown RBP12.75□□□□□ -0.37
COL18A1-205ENST00000423214 KMT2CQ8NEZ4 4911 aaKnown RBP12.74□□□□□ -0.37
COL18A1-205ENST00000423214 IGHV3-72A0A0B4J1Y9 119 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 IGHV1-3A0A0C4DH29 117 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 AP4M1O00189 453 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 SDCBPO00560 298 aaPredicted RBP12.74□□□□□ -0.37
COL18A1-205ENST00000423214 OGG1O15527 345 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 CDRT1O95170 752 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 SERPINA2P20848 420 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 ST3GAL4Q11206 333 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 CCDC58Q4VC31 144 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 LAIR2Q6ISS4 152 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 ZNF529Q6P280 563 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 LINC00596Q86U02 117 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 IZUMO1Q8IYV9 350 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 OR13C5Q8NGS8 318 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 OR52N1Q8NH53 320 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 TMEM106AQ96A25 262 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 GON7Q9BXV9 100 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 LIN7CQ9NUP9 197 aaKnown RBP12.74□□□□□ -0.37
COL18A1-205ENST00000423214 PAK1IP1Q9NWT1 392 aaPredicted RBP12.74□□□□□ -0.37
COL18A1-205ENST00000423214 CHCHD3Q9NX63 227 aaKnown RBP12.74□□□□□ -0.37
COL18A1-205ENST00000423214 NKX1-2Q9UD57 310 aaPredicted RBP12.74□□□□□ -0.37
COL18A1-205ENST00000423214 ING4Q9UNL4 249 aa12.74□□□□□ -0.37
COL18A1-205ENST00000423214 CASQ2O14958 399 aaPredicted RBP12.73□□□□□ -0.37
COL18A1-205ENST00000423214 RRP9O43818 475 aaKnown RBP12.73□□□□□ -0.37
COL18A1-205ENST00000423214 GZMHP20718 246 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 ZNF93P35789 620 aaPredicted RBP12.73□□□□□ -0.37
COL18A1-205ENST00000423214 GP2P55259 537 aaKnown RBP12.73□□□□□ -0.37
COL18A1-205ENST00000423214 DGCR2P98153 550 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 NHLRC3Q5JS37 347 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 ATAD3CQ5T2N8 411 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 TEX38Q6PEX7 206 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 TGIF2LXQ8IUE1 241 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 C8orf59Q8N0T1 100 aaPredicted RBP12.73□□□□□ -0.37
COL18A1-205ENST00000423214 OR2T10Q8NGZ9 312 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 ARL11Q969Q4 196 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 EAF1Q96JC9 268 aaPredicted RBP12.73□□□□□ -0.37
COL18A1-205ENST00000423214 WWC2-AS2Q96NR7 200 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 DUX3Q96PT4 197 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 P2RX4Q99571 388 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 IFT22Q9H7X7 185 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 TMEM138Q9NPI0 162 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 IL36GQ9NZH8 169 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 ZNF581Q9P0T4 197 aa12.73□□□□□ -0.37
COL18A1-205ENST00000423214 PNMA8CA0A1B0GUJ8 204 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 AIPO00170 330 aa12.72□□□□□ -0.37
COL18A1-205ENST00000423214 CCL24O00175 119 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms