RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 CD207Q9UJ71 328 aa14.31□□□□□ -0.12
PKP4-204ENST00000421462 TRBV24-1A0A075B6N3 115 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 LRRC3CA6NJW4 275 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 PAX9P55771 341 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 PNRC1Q12796 327 aaPredicted RBP14.3□□□□□ -0.12
PKP4-204ENST00000421462 EXT1Q16394 746 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 RAET1LQ5VY80 246 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 GATAD1Q8WUU5 269 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 IL1F10Q8WWZ1 152 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 LHX4Q969G2 390 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 RAB24Q969Q5 203 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 CDH20Q9HBT6 801 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 MAP1LC3B2A6NCE7 125 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 DHHO43323 396 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 ZNF737O75373 536 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 DEFA4P12838 97 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 CNN3Q15417 329 aaKnown RBP14.3□□□□□ -0.12
PKP4-204ENST00000421462 LBHQ53QV2 105 aaPredicted RBP14.3□□□□□ -0.12
PKP4-204ENST00000421462 OR8G2PQ6IF36 304 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 OR8G5Q8NG78 346 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 EXTL1Q92935 676 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 MAP1LC3BQ9GZQ8 125 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 SRD5A3Q9H8P0 318 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 UCK1Q9HA47 277 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 B4GALT1P15291 398 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 VDAC1P21796 283 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 CHRNA7P36544 502 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 BSXQ3C1V8 233 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 H1FOOQ8IZA3 346 aaPredicted RBP14.3□□□□□ -0.12
PKP4-204ENST00000421462 HS3ST6Q96QI5 342 aa14.3□□□□□ -0.12
PKP4-204ENST00000421462 CISD1Q9NZ45 108 aaKnown RBP14.3□□□□□ -0.12
PKP4-204ENST00000421462 TRAV39A0A0B4J263 110 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 NUBP1P53384 320 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 CFHR1Q03591 330 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 ARL16Q0P5N6 197 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 SPANXN5Q5MJ07 72 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 ALKBH3Q96Q83 286 aaPredicted RBP14.29□□□□□ -0.12
PKP4-204ENST00000421462 SLC25A22Q9H936 323 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 DCAF16Q9NXF7 216 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 TAAR3PQ9P1P4 343 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 FGF5P12034 268 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 SRPXP78539 464 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 ID3Q02535 119 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 TMEM241Q24JQ0 296 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 ZNF611Q8N823 705 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 SPSB1Q96BD6 273 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 SLC39A9Q9NUM3 307 aa14.29□□□□□ -0.12
PKP4-204ENST00000421462 A0A0U1RQK1 487 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 A0A1W2PPC4 97 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 SERPINE2P07093 398 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 EGR1P18146 543 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 IL24Q13007 206 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 WDR5BQ86VZ2 330 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 OR4F5Q8NH21 305 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 TMEM18Q96B42 140 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 OR4F4Q96R69 305 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 ACTR3CQ9C0K3 210 aaPredicted RBP14.28□□□□□ -0.12
PKP4-204ENST00000421462 ATG2AQ2TAZ0 1938 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 UBE2L5PA0A1B0GUS4 154 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 AQP7P3A6NL99 342 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 IGLV3-1P01715 115 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 IGHV3-9P01782 118 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 ANKRD37Q7Z713 158 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 VAX2Q9UIW0 290 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 SLC22A20A6NK97 555 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 M0R143 59 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 PSG2P11465 335 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 PMP22Q01453 160 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 HLA-BQ31612 363 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 PLPPR1Q8TBJ4 325 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 IL22RA2Q969J5 263 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 GPR146Q96CH1 333 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 TMEM106CQ9BVX2 250 aa14.28□□□□□ -0.12
PKP4-204ENST00000421462 RBM7Q9Y580 266 aaKnown RBP14.28□□□□□ -0.12
PKP4-204ENST00000421462 LILRA5A6NI73 299 aa14.27□□□□□ -0.12
PKP4-204ENST00000421462 SUMO3P55854 103 aaPredicted RBP14.27□□□□□ -0.12
PKP4-204ENST00000421462 ZNF92Q03936 586 aa14.27□□□□□ -0.12
PKP4-204ENST00000421462 BAXQ07812 192 aa14.27□□□□□ -0.12
PKP4-204ENST00000421462 NMSQ5H8A3 153 aa14.27□□□□□ -0.12
PKP4-204ENST00000421462 OR2V1Q8NHB1 315 aa14.27□□□□□ -0.12
PKP4-204ENST00000421462 NABP1Q96AH0 204 aa14.27□□□□□ -0.12
PKP4-204ENST00000421462 CACNG5Q9UF02 275 aa14.27□□□□□ -0.12
PKP4-204ENST00000421462 MDH2P40926 338 aaKnown RBP14.27□□□□□ -0.13
PKP4-204ENST00000421462 HERPUD1Q15011 391 aa14.27□□□□□ -0.13
PKP4-204ENST00000421462 HIST3H3Q16695 136 aa14.27□□□□□ -0.13
PKP4-204ENST00000421462 Q6ZRM9 215 aa14.27□□□□□ -0.13
PKP4-204ENST00000421462 OR2M3Q8NG83 312 aa14.27□□□□□ -0.13
PKP4-204ENST00000421462 TMEM56Q96MV1 263 aa14.27□□□□□ -0.13
PKP4-204ENST00000421462 TMEM56-RWDD3S4R434 201 aa14.27□□□□□ -0.13
PKP4-204ENST00000421462 PFN1P07737 140 aaKnown RBP14.26□□□□□ -0.13
PKP4-204ENST00000421462 UCP3P55916 312 aa14.26□□□□□ -0.13
PKP4-204ENST00000421462 RBM11P57052 281 aaKnown RBP14.26□□□□□ -0.13
PKP4-204ENST00000421462 SDSLQ96GA7 329 aa14.26□□□□□ -0.13
PKP4-204ENST00000421462 SGCZQ96LD1 299 aa14.26□□□□□ -0.13
PKP4-204ENST00000421462 FKBP11Q9NYL4 201 aa14.26□□□□□ -0.13
PKP4-204ENST00000421462 PSENENQ9NZ42 101 aa14.26□□□□□ -0.13
PKP4-204ENST00000421462 NAT8Q9UHE5 227 aa14.26□□□□□ -0.13
PKP4-204ENST00000421462 MTCH2Q9Y6C9 303 aa14.26□□□□□ -0.13
PKP4-204ENST00000421462 FREM1Q5H8C1 2179 aa14.26□□□□□ -0.13
PKP4-204ENST00000421462 TGOLN2O43493 480 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms