RNA–Protein interactions for RNA: ENST00000420503.1

LINC00339-203, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-203ENST00000420503 ISG20L2Q9H9L3 353 aaKnown RBP10.03□□□□□ -0.8
LINC00339-203ENST00000420503 PCDHB16Q9NRJ7 776 aa10.03□□□□□ -0.8
LINC00339-203ENST00000420503 C15orf65H3BRN8 121 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 J3QLW9 94 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 SLC16A6O15403 523 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 HTR1AP08908 422 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 SLC2A2P11168 524 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-203ENST00000420503 ZNF19P17023 458 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 SLC6A1P30531 599 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 CDX1P47902 265 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-203ENST00000420503 GNB1P62873 340 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 ZNF816Q0VGE8 651 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-203ENST00000420503 FOXE3Q13461 319 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 FDX2Q6P4F2 183 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 C5orf24Q7Z6I8 188 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 TGIF2LXQ8IUE1 241 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 IZUMO1Q8IYV9 350 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 RNF152Q8N8N0 203 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 OR11H1Q8NG94 326 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 HAVCR2Q8TDQ0 301 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 CCDC107Q8WV48 283 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 C4orf3Q8WVX3 66 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 RNFT2Q96EX2 444 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 PDCD1LG2Q9BQ51 273 aa10.02□□□□□ -0.81
LINC00339-203ENST00000420503 LIN7CQ9NUP9 197 aaKnown RBP10.02□□□□□ -0.81
LINC00339-203ENST00000420503 G3V318 75 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 CASQ2O14958 399 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-203ENST00000420503 ZFPL1O95159 310 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 CDRT1O95170 752 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 MYF6P23409 242 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 CHATP28329 748 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 MTNR1BP49286 362 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 ALKBH1Q13686 389 aaKnown RBP10.01□□□□□ -0.81
LINC00339-203ENST00000420503 HAPLN4Q86UW8 402 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 ZNF565Q8N9K5 539 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 SUMF2Q8NBJ7 301 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 OR8J1Q8NGP2 316 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 TNFAIP8L1Q8WVP5 186 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 RGP1Q92546 391 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-203ENST00000420503 ST6GALNAC6Q969X2 333 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 ORAI1Q96D31 301 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 RITA1Q96K30 269 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 KCTD7Q96MP8 289 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 S1PR3Q99500 378 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 DPCDQ9BVM2 203 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-203ENST00000420503 WSB1Q9Y6I7 421 aa10.01□□□□□ -0.81
LINC00339-203ENST00000420503 LCE6AA0A183 80 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 A0A1W2PP11 408 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 DAPL1A0PJW8 107 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 TRIM64CA6NLI5 447 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 SULT1B1O43704 296 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 IGHG4P01861 327 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 GAPDHP04406 335 aaKnown RBP10□□□□□ -0.81
LINC00339-203ENST00000420503 ELANEP08246 267 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 FRMD6-AS1P0C7T7 363 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 CNTFRP26992 372 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 PSMB8P28062 276 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 C21orf33P30042 268 aaPredicted RBP10□□□□□ -0.81
LINC00339-203ENST00000420503 OGFRL1Q5TC84 451 aaPredicted RBP10□□□□□ -0.81
LINC00339-203ENST00000420503 ELP2Q6IA86 826 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 ADAMTSL5Q6ZMM2 481 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 LHFPL3Q86UP9 236 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 SATL1Q86VE3 508 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 FAM71E2Q8N5Q1 922 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 OR2T10Q8NGZ9 312 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 MYOZ3Q8TDC0 251 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 CASTOR1Q8WTX7 329 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 RTN4IP1Q8WWV3 396 aaPredicted RBP10□□□□□ -0.81
LINC00339-203ENST00000420503 FAM192AQ9GZU8 254 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 ISYNA1Q9NPH2 558 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 TAS2R4Q9NYW5 299 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 NKX1-2Q9UD57 310 aaPredicted RBP10□□□□□ -0.81
LINC00339-203ENST00000420503 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
LINC00339-203ENST00000420503 CSMD3Q7Z407 3707 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 SDCBPO00560 298 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-203ENST00000420503 HTR3BO95264 441 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 SNRPBP14678 240 aaKnown RBP9.99□□□□□ -0.81
LINC00339-203ENST00000420503 SPNP16150 400 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 VHLP40337 213 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 SOX2P48431 317 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 CCR9P51686 369 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 ZNF134P52741 427 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 GP2P55259 537 aaKnown RBP9.99□□□□□ -0.81
LINC00339-203ENST00000420503 ZIK1Q3SY52 487 aaPredicted RBP9.99□□□□□ -0.81
LINC00339-203ENST00000420503 OR10V1Q8NGI7 309 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 DCUN1D4Q92564 292 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 ARL11Q969Q4 196 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 LGALS12Q96DT0 336 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 RDH12Q96NR8 316 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 LYSTQ99698 3801 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 BARHL1Q9BZE3 327 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 GFOD1Q9NXC2 390 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 ORC6Q9Y5N6 252 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 TNCP24821 2201 aa9.99□□□□□ -0.81
LINC00339-203ENST00000420503 I3L521 148 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 GEMIN2O14893 280 aaKnown RBP9.98□□□□□ -0.81
LINC00339-203ENST00000420503 MPZL2O60487 215 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 MOSP00540 346 aa9.98□□□□□ -0.81
LINC00339-203ENST00000420503 DBTP11182 482 aaKnown RBP9.98□□□□□ -0.81
LINC00339-203ENST00000420503 VDAC1P21796 283 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms