RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 FGF16O43320 207 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 GAPDHP04406 335 aaKnown RBP16.98■□□□□ 0.31
PTPN4-202ENST00000420482 FSTP19883 344 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 IL3RAP26951 378 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 SLC35A2P78381 396 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 ST3GAL4Q11206 333 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 FBLN7Q53RD9 439 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 CDH26Q8IXH8 852 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 C8orf59Q8N0T1 100 aaPredicted RBP16.98■□□□□ 0.31
PTPN4-202ENST00000420482 JAGN1Q8N5M9 183 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 DRAM1Q8N682 238 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 MYDGFQ969H8 173 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 ARL11Q969Q4 196 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 CNOT2Q9NZN8 540 aaKnown RBP16.98■□□□□ 0.31
PTPN4-202ENST00000420482 CLEC2DQ9UHP7 191 aa16.98■□□□□ 0.31
PTPN4-202ENST00000420482 A0A1W2PPI3 338 aa16.97■□□□□ 0.31
PTPN4-202ENST00000420482 MCRIP1C9JLW8 97 aa16.97■□□□□ 0.31
PTPN4-202ENST00000420482 AIPO00170 330 aa16.97■□□□□ 0.31
PTPN4-202ENST00000420482 SDCBPO00560 298 aaPredicted RBP16.97■□□□□ 0.31
PTPN4-202ENST00000420482 HSD17B6O14756 317 aa16.97■□□□□ 0.31
PTPN4-202ENST00000420482 ORC5O43913 435 aa16.97■□□□□ 0.31
PTPN4-202ENST00000420482 AMY1AP04745 511 aa16.97■□□□□ 0.31
PTPN4-202ENST00000420482 AMY2AP04746 511 aa16.97■□□□□ 0.31
PTPN4-202ENST00000420482 WFDC9Q8NEX5 89 aa16.97■□□□□ 0.31
PTPN4-202ENST00000420482 OR13C5Q8NGS8 318 aa16.97■□□□□ 0.31
PTPN4-202ENST00000420482 CHPT1Q8WUD6 406 aa16.97■□□□□ 0.31
PTPN4-202ENST00000420482 GGHQ92820 318 aa16.97■□□□□ 0.31
PTPN4-202ENST00000420482 MRPS28Q9Y2Q9 187 aaKnown RBP16.97■□□□□ 0.31
PTPN4-202ENST00000420482 PSMB11A5LHX3 300 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 CCRL2O00421 344 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 PIN1P1O15428 100 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 DUS4LO95620 317 aaKnown RBP16.96■□□□□ 0.31
PTPN4-202ENST00000420482 LALBAP00709 142 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 MAPK3P27361 379 aaPredicted RBP16.96■□□□□ 0.31
PTPN4-202ENST00000420482 ADARB1P78563 741 aaKnown RBP16.96■□□□□ 0.31
PTPN4-202ENST00000420482 ZNF816Q0VGE8 651 aaPredicted RBP16.96■□□□□ 0.31
PTPN4-202ENST00000420482 TMEM30BQ3MIR4 351 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 Q3ZCU0 254 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 UTF1Q5T230 341 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 MOB3BQ86TA1 216 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 C8orf31Q8N9H6 132 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 ORAI1Q96D31 301 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 OR14A2Q96R54 314 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 VCXQ9H320 206 aa16.96■□□□□ 0.31
PTPN4-202ENST00000420482 TRAV39A0A0B4J263 110 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 SH2D7A6NKC9 451 aaPredicted RBP16.95■□□□□ 0.3
PTPN4-202ENST00000420482 SPINT2O43291 252 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 IGKV1D-33P01593 117 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 IGKV1-33P01594 117 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 CAPGP40121 348 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 SLC35B1P78383 322 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 DOC2BQ14184 412 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 RCN1Q15293 331 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 C6orf183Q5T699 404 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 AWAT2Q6E213 333 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 GLIPR1L1Q6UWM5 242 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 ZNF497Q6ZNH5 498 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 FOXRED2Q8IWF2 684 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 NKAIN3Q8N8D7 197 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 ZFP41Q8N8Y5 198 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 OR51D1Q8NGF3 324 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 MRAPQ8TCY5 172 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 CCDC107Q8WV48 283 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 MUL1Q969V5 352 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 PHF21AQ96BD5 680 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 RCC1LQ96I51 464 aaKnown RBP16.95■□□□□ 0.3
PTPN4-202ENST00000420482 PGLYRP3Q96LB9 341 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 TRAPPC2LQ9UL33 140 aa16.95■□□□□ 0.3
PTPN4-202ENST00000420482 FAM90A10PA6NDY2 464 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 FAM90A7PA6NKC0 464 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 SERPINE3A8MV23 424 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 FAM90A23PA8MXZ1 464 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 WNT4P56705 351 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 RPS11P62280 158 aaKnown RBP eCLIP16.94■□□□□ 0.3
PTPN4-202ENST00000420482 HNF4GQ14541 408 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 TCTEX1D4Q5JR98 221 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 TRAT1Q6PIZ9 186 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 LINC00311Q8N616 119 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 COMMD1Q8N668 190 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 C5orf56Q8N8D9 126 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 GFOD1Q9NXC2 390 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 NOTCH3Q9UM47 2321 aa16.94■□□□□ 0.3
PTPN4-202ENST00000420482 TRAV8-7A0A075B6U6 113 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 TRBV5-7A0A0A0MS05 114 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 IGHV1-3A0A0C4DH29 117 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 PNMA8CA0A1B0GUJ8 204 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 A0A1W2PPE3 182 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 TXNL1O43396 289 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 CA11O75493 328 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 PRB2P02812 416 aaPredicted RBP16.93■□□□□ 0.3
PTPN4-202ENST00000420482 MT-ND4P03905 459 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 MAS1P04201 325 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 CD1AP06126 327 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 CELP19835 753 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 SLC6A1P30531 599 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 LOXL3P58215 753 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 SLC35E3Q7Z769 313 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 ZNF485Q8NCK3 441 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 OR2T10Q8NGZ9 312 aa16.93■□□□□ 0.3
PTPN4-202ENST00000420482 GPR61Q9BZJ8 451 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms