RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 DDA1Q9BW61 102 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 SMDT1Q9H4I9 107 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 KLF13Q9Y2Y9 288 aaPredicted RBP10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 OR2W1Q9Y3N9 320 aa10.02□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 ZNF724A8MTY0 619 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 PGLYRP1O75594 196 aaPredicted RBP10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 HBE1P02100 147 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 ARG1P05089 322 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 MPLP40238 635 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 MEOX2P50222 304 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 SLC10A1Q14973 349 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 Q8NFD4 153 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 OR5D13Q8NGL4 314 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 HS3ST6Q96QI5 342 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 ARRDC1-AS1Q9H2J1 176 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 K7N7A8 449 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 CBR1P16152 277 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 OR2B8PP59922 312 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 ZNF154Q13106 437 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 FRYLO94915 3013 aa10.01□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 LRP5LA4QPB2 252 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 OR2C1O95371 312 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 MMP9P14780 707 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 RNF212Q495C1 297 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 HIKESHIQ53FT3 197 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 SHEQ5VZ18 495 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 Q6ZPA2 131 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 TMEM105Q8N8V8 129 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 KDF1Q8NAX2 398 aaPredicted RBP10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 POM121L2Q96KW2 1035 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 KLF2Q9Y5W3 355 aaPredicted RBP10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 C21orf140B9A014 251 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 FAM157AC9JC47 383 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 CD46P15529 392 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 UBE2KP61086 200 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 IL24Q13007 206 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 VASH2Q86V25 355 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 OR5P3Q8WZ94 311 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 RARRES2Q99969 163 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 RTL8AQ9BWD3 113 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 FREM1Q5H8C1 2179 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 IFNA17P01571 189 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 TDGF1P13385 188 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 RAB5AP20339 215 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 PAX6P26367 422 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 MEOX1P50221 254 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 UBE2NP61088 152 aaKnown RBP10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 HLA-DRB3P79483 266 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 RUNX1Q01196 453 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 HERPUD1Q15011 391 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 THNSL2Q86YJ6 484 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 IL22RA2Q969J5 263 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 ESRP2Q9H6T0 727 aaKnown RBP10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 CDH20Q9HBT6 801 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 PPP1R3CQ9UQK1 317 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 GPR179Q6PRD1 2367 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 ZNF407Q9C0G0 2248 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 NCOR1O75376 2440 aa10□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 hCG_1809904A0A1W2PP81 198 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 A0A1W2PPE2 198 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 A0A1W2PR64 198 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 A0A1W2PRV1 198 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 C9orf172C9J069 976 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 PROB1E7EW31 1015 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 SIRPB1O00241 398 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 ZXDAP98168 799 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 TGIF1Q15583 401 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 TBC1D28Q2M2D7 210 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 OR10V1Q8NGI7 309 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 FER1L6-AS2Q96M78 137 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 RAB40CQ96S21 281 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 ATP5SQ99766 215 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 NIPSNAP3BQ9BS92 247 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 DEFB127Q9H1M4 99 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 TUBA4BQ9H853 241 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 FOXJ2Q9P0K8 574 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 KIAA1456Q9P272 454 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 WDR1O75083 606 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 TUSC2O75896 110 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 NXPH2O95156 264 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 FOLR2P14207 255 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 TAGLN2P37802 199 aaKnown RBP9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 ID3Q02535 119 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 TGFBR3Q03167 851 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 OR8G1Q15617 311 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 NMSQ5H8A3 153 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 NUFIP2Q7Z417 695 aaKnown RBP9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 LILRB2Q8N423 598 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 RNF122Q9H9V4 155 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 CRIM1Q9NZV1 1036 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 POLDIP2Q9Y2S7 368 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 LIPGQ9Y5X9 500 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 A0A1B0GU03 582 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 S100A8P05109 93 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 PSG2P11465 335 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 HABP2Q14520 560 aaPredicted RBP9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 FIP1L1Q6UN15 594 aaKnown RBP9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 MRPL30Q8TCC3 161 aaKnown RBP9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 TMEM171Q8WVE6 324 aa9.99□□□□□ -0.81
CSPG4P3Y-201ENST00000418188 GTF3AQ92664 365 aaKnown RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms