RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 ATAD3CQ5T2N8 411 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 DRAM1Q8N682 238 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 ZNF485Q8NCK3 441 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 OR52M1Q8NGK5 317 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 OR10X1Q8NGY0 326 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 OR56B4Q8NH76 319 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 MYDGFQ969H8 173 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 ZNF581Q9P0T4 197 aa13.99□□□□□ -0.17
PDLIM2-208ENST00000416159 EFCAB10A6NFE3 127 aa13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 PRB2P02812 416 aaPredicted RBP13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 TMEM11P17152 192 aa13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 FSTP19883 344 aa13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 HES1Q14469 280 aa13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 ZFP41Q8N8Y5 198 aa13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 NEK7Q8TDX7 302 aa13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 SGCDQ92629 289 aa13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 ARL11Q969Q4 196 aa13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 PGLYRP3Q96LB9 341 aa13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 SPACA1Q9HBV2 294 aa13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 NECAP2Q9NVZ3 263 aa13.98□□□□□ -0.17
PDLIM2-208ENST00000416159 TRBV5-7A0A0A0MS05 114 aa13.97□□□□□ -0.17
PDLIM2-208ENST00000416159 FGF16O43320 207 aa13.97□□□□□ -0.17
PDLIM2-208ENST00000416159 ORC5O43913 435 aa13.97□□□□□ -0.17
PDLIM2-208ENST00000416159 PF4P02776 101 aa13.97□□□□□ -0.17
PDLIM2-208ENST00000416159 ZNF816Q0VGE8 651 aaPredicted RBP13.97□□□□□ -0.17
PDLIM2-208ENST00000416159 DIAPH2-AS1Q14236 149 aa13.97□□□□□ -0.17
PDLIM2-208ENST00000416159 CDH26Q8IXH8 852 aa13.97□□□□□ -0.17
PDLIM2-208ENST00000416159 STX19Q8N4C7 294 aa13.97□□□□□ -0.17
PDLIM2-208ENST00000416159 LINC00311Q8N616 119 aa13.97□□□□□ -0.17
PDLIM2-208ENST00000416159 MRPS24Q96EL2 167 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-208ENST00000416159 CNOT2Q9NZN8 540 aaKnown RBP13.97□□□□□ -0.17
PDLIM2-208ENST00000416159 TRAV8-7A0A075B6U6 113 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 A0A1W2PP11 408 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 A0A1W2PPE3 182 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 MAGEA13PA6NCF6 341 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 C15orf65H3BRN8 121 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 MT-ND4P03905 459 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 GAPDHP04406 335 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 CD1AP06126 327 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 C10orf99Q6UWK7 81 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 GLIPR1L1Q6UWM5 242 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 ZNF497Q6ZNH5 498 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 C8orf59Q8N0T1 100 aaPredicted RBP13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 JAGN1Q8N5M9 183 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 C8orf31Q8N9H6 132 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 CCDC107Q8WV48 283 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 MUL1Q969V5 352 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 PHF21AQ96BD5 680 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 OR14A2Q96R54 314 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 RAB9BQ9NP90 201 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 GFOD1Q9NXC2 390 aa13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 MRPS28Q9Y2Q9 187 aaKnown RBP13.96□□□□□ -0.17
PDLIM2-208ENST00000416159 PSMB11A5LHX3 300 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 MCRIP1C9JLW8 97 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 AIPO00170 330 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 CCRL2O00421 344 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 SDCBPO00560 298 aaPredicted RBP13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 HSD17B6O14756 317 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 IGKV1D-33P01593 117 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 IGKV1-33P01594 117 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 CAPGP40121 348 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 EBI3Q14213 229 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 HNF4GQ14541 408 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 RCN1Q15293 331 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 Q3ZCU0 254 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 KHDC1LQ5JSQ8 128 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 Q6ZPA2 131 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 MOB3BQ86TA1 216 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 C5orf56Q8N8D9 126 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 CHPT1Q8WUD6 406 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 PLCXD1Q9NUJ7 323 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 RCC2Q9P258 522 aaKnown RBP13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 PSORS1C1Q9UIG5 152 aa13.95□□□□□ -0.18
PDLIM2-208ENST00000416159 IGHV1-3A0A0C4DH29 117 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 PNMA8CA0A1B0GUJ8 204 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 A0A1W2PPK0 400 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 FAM90A10PA6NDY2 464 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 FAM90A7PA6NKC0 464 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 FAM90A23PA8MXZ1 464 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 MYL12BO14950 172 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 MAS1P04201 325 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 IGLL1P15814 213 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 IL3RAP26951 378 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 WNT4P56705 351 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 LOXL3P58215 753 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 FOXB2Q5VYV0 432 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 AWAT2Q6E213 333 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 MRAPQ8TCY5 172 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 THRSPQ92748 146 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 DERL3Q96Q80 235 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 TRAPPC2LQ9UL33 140 aa13.94□□□□□ -0.18
PDLIM2-208ENST00000416159 PIN1P1O15428 100 aa13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 SPINT2O43291 252 aa13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 CELP19835 753 aa13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 SLC35A2P78381 396 aa13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 DOC2BQ14184 412 aa13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 TMEM30BQ3MIR4 351 aa13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 C6orf183Q5T699 404 aa13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 LAIR2Q6ISS4 152 aa13.93□□□□□ -0.18
PDLIM2-208ENST00000416159 UBALD1Q8TB05 177 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms