RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 FAM25EA8MYX2 175 aa12.25□□□□□ -0.45
SGCE-202ENST00000415788 CRYBA1P05813 215 aa12.25□□□□□ -0.45
SGCE-202ENST00000415788 PGAM2P15259 253 aa12.25□□□□□ -0.45
SGCE-202ENST00000415788 FUT6P51993 359 aa12.25□□□□□ -0.45
SGCE-202ENST00000415788 EIF5AP63241 154 aaKnown RBP12.25□□□□□ -0.45
SGCE-202ENST00000415788 PDZK1IP1Q13113 114 aa12.25□□□□□ -0.45
SGCE-202ENST00000415788 CDNFQ49AH0 187 aa12.25□□□□□ -0.45
SGCE-202ENST00000415788 FAM76BQ5HYJ3 339 aa12.25□□□□□ -0.45
SGCE-202ENST00000415788 ASPHD2Q6ICH7 369 aa12.25□□□□□ -0.45
SGCE-202ENST00000415788 ZNF529Q6P280 563 aa12.25□□□□□ -0.45
SGCE-202ENST00000415788 BOLLQ8N9W6 283 aaKnown RBP12.25□□□□□ -0.45
SGCE-202ENST00000415788 OR13C9Q8NGT0 318 aa12.25□□□□□ -0.45
SGCE-202ENST00000415788 CPNE2Q96FN4 548 aaPredicted RBP12.25□□□□□ -0.45
SGCE-202ENST00000415788 RAB22AQ9UL26 194 aa12.25□□□□□ -0.45
SGCE-202ENST00000415788 AKR1C2P52895 323 aa12.24□□□□□ -0.45
SGCE-202ENST00000415788 ATP5J2P56134 94 aa12.24□□□□□ -0.45
SGCE-202ENST00000415788 AKR1C1Q04828 323 aa12.24□□□□□ -0.45
SGCE-202ENST00000415788 OR4A4PQ8NGN8 299 aa12.24□□□□□ -0.45
SGCE-202ENST00000415788 RXFP4Q8TDU9 374 aa12.24□□□□□ -0.45
SGCE-202ENST00000415788 ITLN1Q8WWA0 313 aa12.24□□□□□ -0.45
SGCE-202ENST00000415788 DCUN1D4Q92564 292 aa12.24□□□□□ -0.45
SGCE-202ENST00000415788 BORCS8Q96FH0 119 aa12.24□□□□□ -0.45
SGCE-202ENST00000415788 NUDT16L1Q9BRJ7 211 aaKnown RBP12.24□□□□□ -0.45
SGCE-202ENST00000415788 TAS2R4Q9NYW5 299 aa12.24□□□□□ -0.45
SGCE-202ENST00000415788 ARFGEF3Q5TH69 2177 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 A0A0B4J2A0 478 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 IGKV1-9A0A0C4DH69 117 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 LRP5LA4QPB2 252 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 ZNF732B4DXR9 585 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 IFNL4K9M1U5 179 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 S100A9P06702 114 aaKnown RBP12.23□□□□□ -0.45
SGCE-202ENST00000415788 LYL1P12980 280 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 NPBWR1P48145 328 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 GPM6AP51674 278 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 PEA15Q15121 130 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 ZNF260Q3ZCT1 412 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 EIF5AL1Q6IS14 154 aaKnown RBP12.23□□□□□ -0.45
SGCE-202ENST00000415788 LHFPL2Q6ZUX7 228 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 ZNF573Q86YE8 665 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 RDH5Q92781 318 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 NRIP2Q9BQI9 281 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 FN3KRPQ9HA64 309 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 CYTL1Q9NRR1 136 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 RCC2Q9P258 522 aaKnown RBP12.23□□□□□ -0.45
SGCE-202ENST00000415788 LPAR3Q9UBY5 353 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 SHPKQ9UHJ6 478 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 POMT1Q9Y6A1 747 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 HECTD1Q9ULT8 2610 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 IGHV1-69-2A0A0G2JMI3 117 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 MEX3AA1L020 520 aaKnown RBP12.23□□□□□ -0.45
SGCE-202ENST00000415788 C5orf51A6NDU8 294 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 IGHV4-39P01824 125 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 FAM157CP0CG43 387 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 RBP2P50120 134 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 ZNF154Q13106 437 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 C15orf54Q8N8G6 183 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 FAM46BQ96A09 425 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 PERPQ96FX8 193 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 CMSS1Q9BQ75 279 aaKnown RBP12.23□□□□□ -0.45
SGCE-202ENST00000415788 PPP1R3CQ9UQK1 317 aa12.23□□□□□ -0.45
SGCE-202ENST00000415788 BAHCC1Q9P281 2608 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 FAM230AA0A1W2PPH8 454 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 TMEM235A6NFC5 223 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 DAOP14920 347 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 KCNJ3P48549 501 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 CAV2P51636 162 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 TRAPPC6BQ86SZ2 158 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 Q8TCH9 128 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 NUDCD2Q8WVJ2 157 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 SMIM8Q96KF7 97 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 ZNF251Q9BRH9 671 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 TCEAL7Q9BRU2 100 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 FGF23Q9GZV9 251 aaPredicted RBP12.22□□□□□ -0.45
SGCE-202ENST00000415788 OR51I2Q9H344 312 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 GCM1Q9NP62 436 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 SMCO4Q9NRQ5 59 aa12.22□□□□□ -0.45
SGCE-202ENST00000415788 UTP20O75691 2785 aaKnown RBP12.21□□□□□ -0.45
SGCE-202ENST00000415788 A6NLC8 198 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 ZNF705EA8MWA4 302 aaPredicted RBP12.21□□□□□ -0.45
SGCE-202ENST00000415788 NDUFS7O75251 213 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 EIF3GO75821 320 aaKnown RBP eCLIP12.21□□□□□ -0.45
SGCE-202ENST00000415788 IFNA6P05013 189 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 CSN2P05814 226 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 GRPP07492 148 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 HCKP08631 526 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 MTCP1P56278 107 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 HMGN3Q15651 99 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 RNF212Q495C1 297 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 PRAMEF6Q5VXH4 476 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 PRSS54Q6PEW0 395 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 KCTD9Q7L273 389 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 WDR86Q86TI4 376 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 OR11L1Q8NGX0 322 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 NPRL2Q8WTW4 380 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 MRGPRFQ96AM1 343 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 SELENOIQ9C0D9 397 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 RHOFQ9HBH0 211 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 DNAJB11Q9UBS4 358 aa12.21□□□□□ -0.45
SGCE-202ENST00000415788 LRRC30A6NM36 301 aa12.21□□□□□ -0.46
SGCE-202ENST00000415788 TAAR5O14804 337 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms