RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 TOR1AO14656 332 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 LDLRAD4O15165 306 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 VENTXO95231 258 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 MT-ND4P03905 459 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 RNASE1P07998 156 aaKnown RBP11.93□□□□□ -0.5
LIMS1-206ENST00000414829 SMIM18P0DKX4 95 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 SDC2P34741 201 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 PRRX1P54821 245 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 CLDN12P56749 244 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 Q3ZCU0 254 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 SIGIRRQ6IA17 410 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 HCP5Q6MZN7 132 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 ABHD12Q8N2K0 398 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 BEND2Q8NDZ0 799 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 OR52M1Q8NGK5 317 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 MALSU1Q96EH3 234 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 ZNF48Q96MX3 618 aaPredicted RBP11.93□□□□□ -0.5
LIMS1-206ENST00000414829 C12orf4Q9NQ89 552 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 IDI2-AS1Q9NZ38 188 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 ZNRD1Q9P1U0 126 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 DAPK2Q9UIK4 370 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 ETV7Q9Y603 341 aa11.93□□□□□ -0.5
LIMS1-206ENST00000414829 TMEM272A0A1B0GTI8 110 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 MEX3AA1L020 520 aaKnown RBP11.92□□□□□ -0.5
LIMS1-206ENST00000414829 HOXA3O43365 443 aaPredicted RBP11.92□□□□□ -0.5
LIMS1-206ENST00000414829 MELTFP08582 738 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 HTR1DP28221 377 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 ACTG1P63261 375 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 C17orf58Q2M2W7 97 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 ZDHHC22Q8N966 263 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 OR13F1Q8NGS4 319 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 OR9G1Q8NH87 305 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 NDNFQ8TB73 568 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 PHF21AQ96BD5 680 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 KIRREL1Q96J84 757 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 CENPOQ9BU64 300 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 CHMP1AQ9HD42 196 aaPredicted RBP11.92□□□□□ -0.5
LIMS1-206ENST00000414829 MBNL3Q9NUK0 354 aaKnown RBP11.92□□□□□ -0.5
LIMS1-206ENST00000414829 ZNF581Q9P0T4 197 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 ABRACLQ9P1F3 81 aa11.92□□□□□ -0.5
LIMS1-206ENST00000414829 A0A1W2PRD5 423 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 A0A1W2PRF3 423 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 A0A1W2PRM7 423 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 UBE2QL1A1L167 161 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 SERPINE3A8MV23 424 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 CRYBA1P05813 215 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 CGB3P0DN86 165 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 CGB7P0DN87 165 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 NFYBP25208 207 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 SSTR5P35346 364 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 DLX1P56177 255 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 SLC9A3R2Q15599 337 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 LRRC75BQ2VPJ9 315 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 CCDC144NLQ6NUI1 221 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 BRICD5Q6PL45 260 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 LIAT1Q6ZQX7 453 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 C6orf201Q7Z4U5 140 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 ARL11Q969Q4 196 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 RAB3CQ96E17 227 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 NICN1Q9BSH3 213 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 FUNDC2Q9BWH2 189 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 KCNK15Q9H427 330 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 RAB18Q9NP72 206 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 ESM1Q9NQ30 184 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 ABCB10Q9NRK6 738 aa11.91□□□□□ -0.5
LIMS1-206ENST00000414829 MDFIC2A0A1B0GVS7 189 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 VGLL3A8MV65 326 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 LEUTXA8MZ59 168 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 OOSP1A8MZH6 123 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 SDCBPO00560 298 aaPredicted RBP11.9□□□□□ -0.5
LIMS1-206ENST00000414829 OMGP23515 440 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 IER3P46695 156 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 VEGFCP49767 419 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 PRB3Q04118 309 aaPredicted RBP11.9□□□□□ -0.5
LIMS1-206ENST00000414829 MXD1Q05195 221 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 KRTAP24-1Q3LI83 254 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 STEAP3Q658P3 488 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 C16orf87Q6PH81 154 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 Q6ZTK2 550 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 GPR141Q7Z602 305 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 NR2C2APQ86WQ0 139 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 C8orf31Q8N9H6 132 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 DTX3Q8N9I9 347 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 DYRK2Q92630 601 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 SULT4A1Q9BR01 284 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 C19orf24Q9BVV8 132 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 MEGF9Q9H1U4 602 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 DPM3Q9P2X0 92 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 PITPNC1Q9UKF7 332 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 VPREB3Q9UKI3 123 aa11.9□□□□□ -0.5
LIMS1-206ENST00000414829 ATRQ13535 2644 aa11.89□□□□□ -0.51
LIMS1-206ENST00000414829 TRBV6-6A0A0A6YYG2 114 aa11.89□□□□□ -0.51
LIMS1-206ENST00000414829 A0A0A6YYH2 397 aa11.89□□□□□ -0.51
LIMS1-206ENST00000414829 A6NJ64 397 aa11.89□□□□□ -0.51
LIMS1-206ENST00000414829 C15orf65H3BRN8 121 aa11.89□□□□□ -0.51
LIMS1-206ENST00000414829 F2RL2O00254 374 aa11.89□□□□□ -0.51
LIMS1-206ENST00000414829 SOCS1O15524 211 aa11.89□□□□□ -0.51
LIMS1-206ENST00000414829 RGS11O94810 467 aa11.89□□□□□ -0.51
LIMS1-206ENST00000414829 LPLP06858 475 aa11.89□□□□□ -0.51
LIMS1-206ENST00000414829 IL3RAP26951 378 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms