RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 IL36GQ9NZH8 169 aa12.34□□□□□ -0.43
ACTB-202ENST00000414620 TRAV8-7A0A075B6U6 113 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 IGHV3-72A0A0B4J1Y9 119 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 TRBV5-5A0A0J9YX44 114 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 PSMB11A5LHX3 300 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 M0QZK8 103 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 HSD17B6O14756 317 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 IGFBP3P17936 291 aaPredicted RBP12.33□□□□□ -0.44
ACTB-202ENST00000414620 RAB7AP51149 207 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 PAX5Q02548 391 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 NHLRC3Q5JS37 347 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 C5orf56Q8N8D9 126 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 ARL11Q969Q4 196 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 MUL1Q969V5 352 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 TMEM80Q96HE8 168 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 NOL4LQ96MY1 436 aaPredicted RBP12.33□□□□□ -0.44
ACTB-202ENST00000414620 LINC00574Q9H8X3 128 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 LINC00527Q9UJ94 153 aa12.33□□□□□ -0.44
ACTB-202ENST00000414620 SDCBPO00560 298 aaPredicted RBP12.32□□□□□ -0.44
ACTB-202ENST00000414620 LOXL3P58215 753 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 MPV17LQ2QL34 196 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 Q499Y3 187 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 DMKNQ6E0U4 476 aaPredicted RBP12.32□□□□□ -0.44
ACTB-202ENST00000414620 MOB3BQ86TA1 216 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 THNSL2Q86YJ6 484 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 OR8H3Q8N146 312 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 JAGN1Q8N5M9 183 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 OR10A7Q8NGE5 316 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 GGHQ92820 318 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 PGLYRP3Q96LB9 341 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 OR14A2Q96R54 314 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 IFT22Q9H7X7 185 aa12.32□□□□□ -0.44
ACTB-202ENST00000414620 PAK1IP1Q9NWT1 392 aaPredicted RBP12.32□□□□□ -0.44
ACTB-202ENST00000414620 CHCHD3Q9NX63 227 aaKnown RBP12.32□□□□□ -0.44
ACTB-202ENST00000414620 C15orf65H3BRN8 121 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 AIPO00170 330 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 CCRL2O00421 344 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 MPIG6BO95866 241 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 MAS1P04201 325 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 GTF2F2P13984 249 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 RPS11P62280 158 aaKnown RBP eCLIP12.31□□□□□ -0.441e-9■□□□□ 9
ACTB-202ENST00000414620 SLC35A2P78381 396 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 MED21Q13503 144 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 YIF1BQ5BJH7 314 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 TTC23Q5W5X9 447 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 GLIPR1L1Q6UWM5 242 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 LINC00596Q86U02 117 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 DHRSXQ8N5I4 330 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 SETD9Q8NE22 299 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 WFDC9Q8NEX5 89 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
ACTB-202ENST00000414620 CYYR1Q96J86 154 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 CKLFQ9UBR5 152 aa12.31□□□□□ -0.44
ACTB-202ENST00000414620 MRPS28Q9Y2Q9 187 aaKnown RBP12.31□□□□□ -0.44
ACTB-202ENST00000414620 IGHV1-3A0A0C4DH29 117 aa12.3□□□□□ -0.44
ACTB-202ENST00000414620 SERPINE3A8MV23 424 aa12.3□□□□□ -0.44
ACTB-202ENST00000414620 SLC31A2O15432 143 aa12.3□□□□□ -0.44
ACTB-202ENST00000414620 ZNF780AO75290 641 aaPredicted RBP12.3□□□□□ -0.44
ACTB-202ENST00000414620 ADARB1P78563 741 aaKnown RBP12.3□□□□□ -0.44
ACTB-202ENST00000414620 ZNF816Q0VGE8 651 aaPredicted RBP12.3□□□□□ -0.44
ACTB-202ENST00000414620 ST3GAL4Q11206 333 aa12.3□□□□□ -0.44
ACTB-202ENST00000414620 DOC2BQ14184 412 aa12.3□□□□□ -0.44
ACTB-202ENST00000414620 AWAT2Q6E213 333 aa12.3□□□□□ -0.44
ACTB-202ENST00000414620 C18orf65Q6ZTR6 163 aa12.3□□□□□ -0.44
ACTB-202ENST00000414620 OR4K15Q8NH41 348 aa12.3□□□□□ -0.44
ACTB-202ENST00000414620 BANF2Q9H503 90 aa12.3□□□□□ -0.44
ACTB-202ENST00000414620 GFOD1Q9NXC2 390 aa12.3□□□□□ -0.44
ACTB-202ENST00000414620 TRBV5-7A0A0A0MS05 114 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 FGF16O43320 207 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 MT-ND4P03905 459 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 GAPDHP04406 335 aaKnown RBP12.29□□□□□ -0.44
ACTB-202ENST00000414620 FSTP19883 344 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 GZMHP20718 246 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 VHLP40337 213 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 RPL23AP62750 156 aaKnown RBP12.29□□□□□ -0.44
ACTB-202ENST00000414620 RCN1Q15293 331 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 ETV3LQ6ZN32 361 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 ZNF497Q6ZNH5 498 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 SLC16A12Q6ZSM3 486 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 AHSA2Q719I0 299 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 SLC35E3Q7Z769 313 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 PRR18Q8N4B5 295 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 STX19Q8N4C7 294 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 ZNF485Q8NCK3 441 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 OR10V1Q8NGI7 309 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 EAF1Q96JC9 268 aaPredicted RBP12.29□□□□□ -0.44
ACTB-202ENST00000414620 ETAA1Q9NY74 926 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 TRAPPC2LQ9UL33 140 aa12.29□□□□□ -0.44
ACTB-202ENST00000414620 LINC01548A6NM66 108 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 NCBP2LA6PVI3 153 aaKnown RBP12.28□□□□□ -0.44
ACTB-202ENST00000414620 NUDT19A8MXV4 375 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 C12orf77C9JDV5 145 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 MCRIP1C9JLW8 97 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 MYL12BO14950 172 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 GPX5O75715 221 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 GNAO1P09471 354 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 HOXD3P31249 432 aaPredicted RBP12.28□□□□□ -0.44
ACTB-202ENST00000414620 GPR176Q14439 515 aa12.28□□□□□ -0.44
ACTB-202ENST00000414620 SYT6Q5T7P8 510 aaPredicted RBP12.28□□□□□ -0.44
ACTB-202ENST00000414620 RAB12Q6IQ22 244 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms