RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 CD34P28906 385 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 EVI2BP34910 448 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 CLDN12P56749 244 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 KLF3P57682 345 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 FAM3AP98173 230 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 FLI1Q01543 452 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 EXOC3L4Q17RC7 722 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 SDHAF4Q5VUM1 108 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 ZNF660Q6AZW8 331 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 C1orf64Q8NEQ6 169 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 OR5D18Q8NGL1 313 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 OR4A5Q8NH83 315 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 SPPL2BQ8TCT7 592 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 SMIM12Q96EX1 92 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 RBP7Q96R05 134 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 TMEM208Q9BTX3 173 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 CHST5Q9GZS9 411 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 METTL9Q9H1A3 318 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 ZNF492Q9P255 531 aa2.62□□□□□ -1.99
HMGB3P31-201ENST00000413333 DAPL1A0PJW8 107 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 A6NED7 52 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 OR5H14A6NHG9 310 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 TMEM250H0YL14 139 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 H3BQ85 93 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 COCHO43405 550 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 ATP8B1O43520 1251 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 CGB3P0DN86 165 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 CGB7P0DN87 165 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 PAFAH1B3Q15102 231 aaKnown RBP2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 CENPWQ5EE01 88 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 OR5L1Q8NGL2 311 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 ZNRF2Q8NHG8 242 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 ANP32BQ92688 251 aaKnown RBP2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 TRIM45Q9H8W5 580 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 KCNIP2Q9NS61 270 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 NKIRAS1Q9NYS0 192 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 RAD50Q92878 1312 aa2.61□□□□□ -1.99
HMGB3P31-201ENST00000413333 PTPRKQ15262 1439 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 IGKV1D-17A0A075B6S4 117 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 SOX14O95416 240 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 GPR75O95800 540 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 IGKV1-17P01599 117 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 CRABP2P29373 138 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 C1QTNF8P60827 252 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 GTF2BQ00403 316 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 CASP8Q14790 479 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 LGALSLQ3ZCW2 172 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 PDZD11Q5EBL8 140 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 SPNS3Q6ZMD2 512 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 ADM2Q7Z4H4 148 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 MTERF4Q7Z6M4 381 aaKnown RBP2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 FER1L6-AS1Q8NA97 138 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 OR9I1Q8NGQ6 314 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 C8orf76Q96K31 380 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 PARVGQ9HBI0 331 aa2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 ZNF230Q9UIE0 474 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 CHD2O14647 1828 aaKnown RBP2.6□□□□□ -1.99
HMGB3P31-201ENST00000413333 A0A0A6YYH2 397 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 SPRR5A0A1B0GTR4 108 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 A6NJ64 397 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 METTL15A6NJ78 407 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 GOLGA8KD6RF30 607 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 GOLGA8MH3BSY2 632 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 CCRL2O00421 344 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 IGHMP01871 453 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 GYPCP04921 128 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 GADD45AP24522 165 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 INPP1P49441 399 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 GABARAPL2P60520 117 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 CTAG1AP78358 180 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 SMAGPQ0VAQ4 97 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 C1DQ13901 141 aaKnown RBP2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 BCL2A1Q16548 175 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 HLA-DRB5Q30154 266 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 ZFAND6Q6FIF0 208 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 DOLPP1Q86YN1 238 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 CPNE9Q8IYJ1 553 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 RIBC1Q8N443 379 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 C2orf73Q8N5S3 287 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 STOML3Q8TAV4 291 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 KCTD4Q8WVF5 259 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 TAMM41Q96BW9 452 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 BCL2L14Q9BZR8 327 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 DUSP21Q9H596 190 aa2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 V9GYY5 206 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P31-201ENST00000413333 BRD4O60885 1362 aaPredicted RBP2.59□□□□□ -2
HMGB3P31-201ENST00000413333 B4DEV8 164 aa2.58□□□□□ -2
HMGB3P31-201ENST00000413333 H3BMM0 161 aa2.58□□□□□ -2
HMGB3P31-201ENST00000413333 K7EQS6 105 aa2.58□□□□□ -2
HMGB3P31-201ENST00000413333 SLC31A1O15431 190 aa2.58□□□□□ -2
HMGB3P31-201ENST00000413333 ZW10O43264 779 aa2.58□□□□□ -2
HMGB3P31-201ENST00000413333 HPGDSO60760 199 aa2.58□□□□□ -2
HMGB3P31-201ENST00000413333 KLHL2O95198 593 aa2.58□□□□□ -2
HMGB3P31-201ENST00000413333 PDYNP01213 254 aa2.58□□□□□ -2
HMGB3P31-201ENST00000413333 CD5P06127 495 aa2.58□□□□□ -2
HMGB3P31-201ENST00000413333 GUSBP08236 651 aa2.58□□□□□ -2
HMGB3P31-201ENST00000413333 INAFM2P0DMQ5 153 aa2.58□□□□□ -2
HMGB3P31-201ENST00000413333 PSMA1P25786 263 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms