RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 FAM90A16PA6NEW6 464 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 FAM90A20PA6NIJ5 464 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 FAM90A9PA6NNJ1 464 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 FAM90A12PA8MX19 464 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 FAM90A5PA8MXJ8 464 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 HSD17B6O14756 317 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 ZNF780AO75290 641 aaPredicted RBP17.73■□□□□ 0.43
MSH6-202ENST00000411819 FAM90A15PP0C7V4 464 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 FAM90A13PP0C7W8 464 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 FAM90A14PP0C7W9 464 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 FAM90A24PP0C7X0 464 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 HNF4GQ14541 408 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 MPV17LQ2QL34 196 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 Q499Y3 187 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 DMKNQ6E0U4 476 aaPredicted RBP17.73■□□□□ 0.43
MSH6-202ENST00000411819 CCDC107Q8WV48 283 aa17.73■□□□□ 0.43
MSH6-202ENST00000411819 SDCBPO00560 298 aaPredicted RBP17.72■□□□□ 0.43
MSH6-202ENST00000411819 IGKV1D-33P01593 117 aa17.72■□□□□ 0.43
MSH6-202ENST00000411819 IGKV1-33P01594 117 aa17.72■□□□□ 0.43
MSH6-202ENST00000411819 GTF2F2P13984 249 aa17.72■□□□□ 0.43
MSH6-202ENST00000411819 IGFBP3P17936 291 aaPredicted RBP17.72■□□□□ 0.43
MSH6-202ENST00000411819 SLC35A2P78381 396 aa17.72■□□□□ 0.43
MSH6-202ENST00000411819 YIF1BQ5BJH7 314 aa17.72■□□□□ 0.43
MSH6-202ENST00000411819 FOXB2Q5VYV0 432 aa17.72■□□□□ 0.43
MSH6-202ENST00000411819 SLC16A12Q6ZSM3 486 aa17.72■□□□□ 0.43
MSH6-202ENST00000411819 JAGN1Q8N5M9 183 aa17.72■□□□□ 0.43
MSH6-202ENST00000411819 ARL11Q969Q4 196 aa17.72■□□□□ 0.43
MSH6-202ENST00000411819 OR14A2Q96R54 314 aa17.72■□□□□ 0.43
MSH6-202ENST00000411819 TRAV8-7A0A075B6U6 113 aa17.71■□□□□ 0.43
MSH6-202ENST00000411819 AIPO00170 330 aa17.71■□□□□ 0.43
MSH6-202ENST00000411819 CCRL2O00421 344 aa17.71■□□□□ 0.43
MSH6-202ENST00000411819 GZMHP20718 246 aa17.71■□□□□ 0.43
MSH6-202ENST00000411819 REG1BP48304 166 aa17.71■□□□□ 0.43
MSH6-202ENST00000411819 STX19Q8N4C7 294 aa17.71■□□□□ 0.43
MSH6-202ENST00000411819 DHRSXQ8N5I4 330 aa17.71■□□□□ 0.43
MSH6-202ENST00000411819 C5orf56Q8N8D9 126 aa17.71■□□□□ 0.43
MSH6-202ENST00000411819 MUL1Q969V5 352 aa17.71■□□□□ 0.43
MSH6-202ENST00000411819 PGLYRP3Q96LB9 341 aa17.71■□□□□ 0.43
MSH6-202ENST00000411819 MRPS28Q9Y2Q9 187 aaKnown RBP17.71■□□□□ 0.43
MSH6-202ENST00000411819 IGHV3-43A0A0B4J1X8 118 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 A0A1W2PPK0 400 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 IGHV3-43DP0DP04 118 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 FSTP19883 344 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 LOXL3P58215 753 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 ST3GAL4Q11206 333 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 GPR176Q14439 515 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 MOB3BQ86TA1 216 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 ZNF329Q86UD4 541 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 PACRGLQ8N7B6 248 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 WFDC9Q8NEX5 89 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 GGHQ92820 318 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 NOL4LQ96MY1 436 aaPredicted RBP17.7■□□□□ 0.42
MSH6-202ENST00000411819 C8orf4Q9NR00 106 aa17.7■□□□□ 0.42
MSH6-202ENST00000411819 IGHV3-72A0A0B4J1Y9 119 aa17.69■□□□□ 0.42
MSH6-202ENST00000411819 SERPINE3A8MV23 424 aa17.69■□□□□ 0.42
MSH6-202ENST00000411819 C15orf65H3BRN8 121 aa17.69■□□□□ 0.42
MSH6-202ENST00000411819 FGF16O43320 207 aa17.69■□□□□ 0.42
MSH6-202ENST00000411819 TAS2R43P59537 309 aa17.69■□□□□ 0.42
MSH6-202ENST00000411819 RPS11P62280 158 aaKnown RBP eCLIP17.69■□□□□ 0.42
MSH6-202ENST00000411819 ADARB1P78563 741 aaKnown RBP17.69■□□□□ 0.42
MSH6-202ENST00000411819 ZNF816Q0VGE8 651 aaPredicted RBP17.69■□□□□ 0.42
MSH6-202ENST00000411819 RCN1Q15293 331 aa17.69■□□□□ 0.42
MSH6-202ENST00000411819 AWAT2Q6E213 333 aa17.69■□□□□ 0.42
MSH6-202ENST00000411819 GLIPR1L1Q6UWM5 242 aa17.69■□□□□ 0.42
MSH6-202ENST00000411819 CHPT1Q8WUD6 406 aa17.69■□□□□ 0.42
MSH6-202ENST00000411819 IGHV1-3A0A0C4DH29 117 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 EFCAB10A6NFE3 127 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 MYL12BO14950 172 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 GPX5O75715 221 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 MAS1P04201 325 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 GAPDHP04406 335 aaKnown RBP17.68■□□□□ 0.42
MSH6-202ENST00000411819 IL3RAP26951 378 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 ZNF497Q6ZNH5 498 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 SLC35E3Q7Z769 313 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 C8orf59Q8N0T1 100 aaPredicted RBP17.68■□□□□ 0.42
MSH6-202ENST00000411819 ZNF485Q8NCK3 441 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 OR52M1Q8NGK5 317 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 SPACA1Q9HBV2 294 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 GFOD1Q9NXC2 390 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 LINC00527Q9UJ94 153 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 TRAPPC2LQ9UL33 140 aa17.68■□□□□ 0.42
MSH6-202ENST00000411819 DNAH3Q8TD57 4116 aa17.67■□□□□ 0.42
MSH6-202ENST00000411819 TRBV5-7A0A0A0MS05 114 aa17.67■□□□□ 0.42
MSH6-202ENST00000411819 MCRIP1C9JLW8 97 aa17.67■□□□□ 0.42
MSH6-202ENST00000411819 ORC5O43913 435 aa17.67■□□□□ 0.42
MSH6-202ENST00000411819 MT-ND4P03905 459 aa17.67■□□□□ 0.42
MSH6-202ENST00000411819 FAM53AQ6NSI3 398 aaPredicted RBP17.67■□□□□ 0.42
MSH6-202ENST00000411819 AHSA2Q719I0 299 aa17.67■□□□□ 0.42
MSH6-202ENST00000411819 PRR18Q8N4B5 295 aa17.67■□□□□ 0.42
MSH6-202ENST00000411819 RCC1LQ96I51 464 aaKnown RBP17.67■□□□□ 0.42
MSH6-202ENST00000411819 ETAA1Q9NY74 926 aa17.67■□□□□ 0.42
MSH6-202ENST00000411819 NCBP2LA6PVI3 153 aaKnown RBP17.66■□□□□ 0.42
MSH6-202ENST00000411819 SYT6Q5T7P8 510 aaPredicted RBP17.66■□□□□ 0.42
MSH6-202ENST00000411819 RAB12Q6IQ22 244 aa17.66■□□□□ 0.42
MSH6-202ENST00000411819 FOXRED2Q8IWF2 684 aa17.66■□□□□ 0.42
MSH6-202ENST00000411819 LINC00311Q8N616 119 aa17.66■□□□□ 0.42
MSH6-202ENST00000411819 OR51D1Q8NGF3 324 aa17.66■□□□□ 0.42
MSH6-202ENST00000411819 OR4K15Q8NH41 348 aa17.66■□□□□ 0.42
MSH6-202ENST00000411819 BANF2Q9H503 90 aa17.66■□□□□ 0.42
MSH6-202ENST00000411819 RCC2Q9P258 522 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms