RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 RSU1Q15404 277 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SUMF2Q8NBJ7 301 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR11H1Q8NG94 326 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 UBALD1Q8TB05 177 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 C4orf3Q8WVX3 66 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 HSPB9Q9BQS6 159 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 DPCDQ9BVM2 203 aaPredicted RBP11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ZNF581Q9P0T4 197 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 DHDHQ9UQ10 334 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SMAD5-AS1Q9Y6J3 95 aa11.13□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ZNF736B4DX44 427 aaPredicted RBP11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SDCBPO00560 298 aaPredicted RBP11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 MAGEB3O15480 346 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 RAB3AP20336 220 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SOX6P35712 828 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 CFHR3Q02985 330 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 FHL3Q13643 280 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 FAM53AQ6NSI3 398 aaPredicted RBP11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 LHFPL3Q86UP9 236 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 LINC00311Q8N616 119 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 TMEM104Q8NE00 496 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 Q8NFD4 153 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR52M1Q8NGK5 317 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR5AK2Q8NH90 309 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 TSEN15Q8WW01 171 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 RTN4IP1Q8WWV3 396 aaPredicted RBP11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ARL11Q969Q4 196 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 RBMXL1Q96E39 390 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 CPNE2Q96FN4 548 aaPredicted RBP11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 MRPL48Q96GC5 212 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 FAM192AQ9GZU8 254 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ISG20L2Q9H9L3 353 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OAZ3Q9UMX2 235 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ST3GAL6Q9Y274 331 aa11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 EXOGQ9Y2C4 368 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 DYNC2H1Q8NCM8 4307 aaKnown RBP11.12□□□□□ -0.63
HLA-DQB2-229ENST00000411527 IGHV3-43A0A0B4J1X8 118 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 TMEM30CPA0ZSE6 113 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 C15orf65H3BRN8 121 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 RPSAP08865 295 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 IGHV3-43DP0DP04 118 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 FCGR1AP12314 374 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 IL3RAP26951 378 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 PSMB8P28062 276 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 INSL3P51460 131 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 F2RL1P55085 397 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SLC25A30Q5SVS4 291 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 MEDAGQ5VYS4 303 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ASCL4Q6XD76 172 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SBSPONQ8IVN8 264 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 C8orf31Q8N9H6 132 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR8H1Q8NGG4 311 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR51A2Q8NGJ7 313 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 CCDC107Q8WV48 283 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ST6GALNAC6Q969X2 333 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 KCTD7Q96MP8 289 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 RCHY1Q96PM5 261 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 PDCD1LG2Q9BQ51 273 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ALG8Q9BVK2 526 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 GFOD1Q9NXC2 390 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 STAB2Q8WWQ8 2551 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SORL1Q92673 2214 aa11.11□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SAC3D1A6NKF1 404 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 TMEM212A6NML5 194 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 E9PI62 339 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR7C1O76099 320 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 CDRT1O95170 752 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 IGF1P05019 195 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SNRPGP62308 76 aaKnown RBP11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 GALEQ14376 348 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 TMEM65Q6PI78 240 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SYS1Q8N2H4 156 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 FAM71E2Q8N5Q1 922 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR1N2Q8NGR9 330 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 LGALS12Q96DT0 336 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 CENPNQ96H22 339 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 MYCBPQ99417 103 aaPredicted RBP11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 AASSQ9UDR5 926 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ING4Q9UNL4 249 aa11.1□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SNTNA6NMZ2 147 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SLC31A2O15432 143 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ORC5O43913 435 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 CSTBP04080 98 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR8U8P0C7N1 319 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR5H8P0DN80 308 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 SOX2P48431 317 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 RBM11P57052 281 aaKnown RBP11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ATAD3CQ5T2N8 411 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 FAM27D1Q5T7N8 215 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ZNF529Q6P280 563 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 ZNF491Q8N8L2 437 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR52N1Q8NH53 320 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 NEK7Q8TDX7 302 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 UBE2E2Q96LR5 201 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 OR5B12Q96R08 314 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 METTL9Q9H1A3 318 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 KLK15Q9H2R5 256 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 IFT22Q9H7X7 185 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 GNB4Q9HAV0 340 aa11.09□□□□□ -0.63
HLA-DQB2-229ENST00000411527 TAS2R4Q9NYW5 299 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms