RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 TMEM183BQ1AE95 376 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 MS4A10Q96PG2 267 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 PGPEP1Q9NXJ5 209 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 RNF7Q9UBF6 113 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 FRMPD3Q5JV73 1810 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 DEDDO75618 318 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 COL9A1P20849 921 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 CCL8P80075 99 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 WDR89Q96FK6 387 aaPredicted RBP9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 SLC25A37Q9NYZ2 338 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 IGSF23A1L1A6 192 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 SLC25A35Q3KQZ1 300 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 TMEM128Q5BJH2 165 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 CCDC144NLQ6NUI1 221 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 OTOSQ8NHW6 89 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 VSTM2AQ8TAG5 236 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 C10orf90Q96M02 699 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 LPAR5Q9H1C0 372 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 COLQQ9Y215 455 aaPredicted RBP9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 FAM186AA6NE01 2351 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 MARF1Q9Y4F3 1742 aaKnown RBP9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 IGHV1OR21-1A0A087WYE8 117 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 WNT9BO14905 357 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 SLC25A42Q86VD7 318 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 TNFRSF12AQ9NP84 129 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 ERVFRD-1P60508 538 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 RNF165Q6ZSG1 346 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 OR1L6Q8NGR2 347 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 MEGF10Q96KG7 1140 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 CCL27Q9Y4X3 112 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 COL6A6A6NMZ7 2263 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 CACNA1GO43497 2377 aa9.91□□□□□ -0.82
PRPF40A-202ENST00000410080 TRDCB7Z8K6 153 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 SRD5A2P31213 254 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 SIGLEC14Q08ET2 396 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 OR4A47Q6IF82 309 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 TP53I13Q8NBR0 393 aaPredicted RBP9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 MS4A5Q9H3V2 200 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 LRRK1Q38SD2 2015 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 GPX2P18283 190 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 RPL31P62899 125 aaKnown RBP9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 SIGIRRQ6IA17 410 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 PHLDA3Q9Y5J5 127 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 MMP24Q9Y5R2 645 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 C21orf140B9A014 251 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 TO15178 435 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 SDK2Q58EX2 2172 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 IGHV3-72A0A0B4J1Y9 119 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 TMEM129A0AVI4 362 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 TFAP2AP05549 437 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 CD96P40200 585 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 COL10A1Q03692 680 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 CDK5R1Q15078 307 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 BAK1Q16611 211 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 SLC25A53Q5H9E4 307 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 TINAGQ9UJW2 476 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 NUDT3O95989 172 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 TMEM229BQ8NBD8 167 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 SOSTQ9BQB4 213 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 GPR35Q9HC97 309 aa9.9□□□□□ -0.82
PRPF40A-202ENST00000410080 FAM78BQ5VT40 261 aa9.9□□□□□ -0.83
PRPF40A-202ENST00000410080 SLC23A3Q6PIS1 610 aa9.9□□□□□ -0.83
PRPF40A-202ENST00000410080 OR4A5Q8NH83 315 aa9.9□□□□□ -0.83
PRPF40A-202ENST00000410080 TMEM204Q9BSN7 226 aa9.9□□□□□ -0.83
PRPF40A-202ENST00000410080 ZNF629Q9UEG4 869 aaPredicted RBP9.9□□□□□ -0.83
PRPF40A-202ENST00000410080 TMEM241Q24JQ0 296 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 PMS2CLQ68D20 193 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 LSMEM1Q8N8F7 131 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 MZB1Q8WU39 189 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 GUCD1Q96NT3 240 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 AQP10Q96PS8 301 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 SEC11CQ9BY50 192 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 PLPP3O14495 311 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 CLLU1Q5K131 121 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 TSPO2Q5TGU0 170 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 ZNF768Q9H5H4 540 aaKnown RBP9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 PYCARD-AS1I3L0S3 204 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 CST4P01036 141 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 PGA3P0DJD8 388 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 FCARP24071 287 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 NMUP48645 174 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 PTP4A1Q93096 173 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 PIPOXQ9P0Z9 390 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 OR51B2Q9Y5P1 312 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 B4GALNT1Q00973 533 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 WBP1LQ9NX94 342 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 DOCK4Q8N1I0 1966 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 AVPR2P30518 371 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 PRICKLE4Q2TBC4 344 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 FAM26EQ8N5C1 309 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 SNRPGP15A8MWD9 76 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 PSG6Q00889 435 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 OR1K1Q8NGR3 316 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 VSTM2LQ96N03 204 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 RAB40CQ96S21 281 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 ABCA4P78363 2273 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 TRAV39A0A0B4J263 110 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 IGLV3-25P01717 112 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 ANKRD55Q3KP44 614 aa9.89□□□□□ -0.83
PRPF40A-202ENST00000410080 TET1Q8NFU7 2136 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms