RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TNFRSF19Q9NS68 423 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 IDI2-AS1Q9NZ38 188 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 FBLN5Q9UBX5 448 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 TRAPPC2LQ9UL33 140 aa8.87□□□□□ -0.99
CHMP3-205ENST00000409810 LOC100506127A0A0U1RQW1 187 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 SHISA3A0PJX4 238 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 NOTOA8MTQ0 251 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 NPIPB11E5RHQ5 1161 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 ORC5O43913 435 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 MT-ND4P03905 459 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 OMGP23515 440 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 NFYBP25208 207 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 HTR1DP28221 377 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 CHATP28329 748 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 BLVRBP30043 206 aaPredicted RBP8.86□□□□□ -0.99
CHMP3-205ENST00000409810 SSTR5P35346 364 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 PRRX1P54821 245 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 CLDN12P56749 244 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 C2orf76Q3KRA6 126 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 TMEM30BQ3MIR4 351 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 SIGIRRQ6IA17 410 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 BRICD5Q6PL45 260 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 GDPGP1Q6ZNW5 385 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 SLC16A12Q6ZSM3 486 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 OR56B1Q8NGI3 324 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 CCDC107Q8WV48 283 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 DYRK2Q92630 601 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 KIRREL1Q96J84 757 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 SSX3Q99909 188 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 NICN1Q9BSH3 213 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 CHIAQ9BZP6 476 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 LPAR5Q9H1C0 372 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 OR51E2Q9H255 320 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 KCNK15Q9H427 330 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 LIN7BQ9HAP6 207 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 ABCB10Q9NRK6 738 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 PLEKHJ1Q9NW61 149 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 VPREB3Q9UKI3 123 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 RAB22AQ9UL26 194 aa8.86□□□□□ -0.99
CHMP3-205ENST00000409810 AMMECR1Q9Y4X0 333 aaPredicted RBP8.86□□□□□ -0.99
CHMP3-205ENST00000409810 TMEM272A0A1B0GTI8 110 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 UBE2QL1A1L167 161 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 FAM172BPA6NC97 362 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 TRIM64CA6NLI5 447 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 LEUTXA8MZ59 168 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 SPINT2O43291 252 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 MMP23AO75900 390 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 IGHV4-59P01825 116 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 CGB3P0DN86 165 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 CGB7P0DN87 165 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 HKR1P10072 659 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 JUNBP17275 347 aaPredicted RBP8.85□□□□□ -0.99
CHMP3-205ENST00000409810 RAB6AP20340 208 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 GADD45AP24522 165 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 CEACAM3P40198 252 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 FOXL1Q12952 345 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 LIAT1Q6ZQX7 453 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 MOB1BQ7L9L4 216 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 LHFPL4Q7Z7J7 247 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 ZNF554Q86TJ5 538 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 GAPTQ8N292 157 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 OR52M1Q8NGK5 317 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 OR4K15Q8NH41 348 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 OR9G1Q8NH87 305 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 ARL11Q969Q4 196 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 RIMS4Q9H426 269 aaPredicted RBP8.85□□□□□ -0.99
CHMP3-205ENST00000409810 ZNF286AQ9HBT8 521 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 CHMP1AQ9HD42 196 aaPredicted RBP8.85□□□□□ -0.99
CHMP3-205ENST00000409810 RAB18Q9NP72 206 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 KCNIP1Q9NZI2 227 aa8.85□□□□□ -0.99
CHMP3-205ENST00000409810 TRAV39A0A0B4J263 110 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 TMEM89A2RUT3 159 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 METTL21EPA6NDL7 271 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 H3BUX3 64 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 SDCBPO00560 298 aaPredicted RBP8.84□□□□□ -0.99
CHMP3-205ENST00000409810 LDLRAD4O15165 306 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 AIREO43918 545 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 GDNFP39905 211 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 VEGFCP49767 419 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 MRPS15P82914 257 aaKnown RBP8.84□□□□□ -0.99
CHMP3-205ENST00000409810 SSX2Q16385 188 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 LTC4SQ16873 150 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 HLA-DRB5Q30154 266 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 Q3ZCU0 254 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 DHRS7BQ6IAN0 325 aaPredicted RBP8.84□□□□□ -0.99
CHMP3-205ENST00000409810 CCDC144NLQ6NUI1 221 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 SFXN4Q6P4A7 337 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 C12orf54Q6X4T0 127 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 Q6ZTK2 550 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 C6orf201Q7Z4U5 140 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 FAM89BQ8N5H3 189 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 OR4P4Q8NGL7 312 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 RFESDQ8TAC1 157 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 MRPL30Q8TCC3 161 aaKnown RBP8.84□□□□□ -0.99
CHMP3-205ENST00000409810 C17orf50Q8WW18 174 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 PTX4Q96A99 478 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 SULT4A1Q9BR01 284 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 MMP28Q9H239 520 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 GFOD1Q9NXC2 390 aa8.84□□□□□ -0.99
CHMP3-205ENST00000409810 DPM3Q9P2X0 92 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms