RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 PPIAL4CA0A0B4J2A2 164 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 CTDSPLO15194 276 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 MSMBP08118 114 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 PPIAL4GP0DN37 164 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 GZMHP20718 246 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 ZFP36P26651 326 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 GLP1RP43220 463 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 ZNF45Q02386 682 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 C6orf183Q5T699 404 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 TRAPPC6BQ86SZ2 158 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 ZNF554Q86TJ5 538 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 FAM185AQ8N0U4 392 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 LY6G5BQ8NDX9 201 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 OR4K15Q8NH41 348 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 MRPL30Q8TCC3 161 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 NUDCD2Q8WVJ2 157 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 CORO2AQ92828 525 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 SOSTQ9BQB4 213 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 GAL3ST2Q9H3Q3 398 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 RAB9BQ9NP90 201 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 C19orf12Q9NSK7 152 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 KCNIP1Q9NZI2 227 aa13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 ELF5Q9UKW6 265 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-208ENST00000409531 C22orf46C9J442 243 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 LPLP06858 475 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 FCGR3AP08637 254 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 MADCAM1Q13477 382 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 SRSF7Q16629 238 aaKnown RBP eCLIP13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 FAM120AOSQ5T036 256 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 BTNL3Q6UXE8 466 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 GLCCI1Q86VQ1 547 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 FCAMRQ8WWV6 532 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 TMEM186Q96B77 213 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 ABHD1Q96SE0 405 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 OCSTAMPQ9BR26 566 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 HDHD3Q9BSH5 251 aaPredicted RBP13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 LPAR2Q9HBW0 351 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 MBNL3Q9NUK0 354 aaKnown RBP13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 HIF1ANQ9NWT6 349 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 TAS2R3Q9NYW6 316 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 OPN4Q9UHM6 478 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 V9GYH0 126 aa13.62□□□□□ -0.23
TSPAN4-208ENST00000409531 TRAV20A0A0B4J274 112 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 IGHV2-70DA0A0C4DH43 119 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 KIR2DS1A0A191URI9 304 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 hCG_1809904A0A1W2PP81 198 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 A0A1W2PPE2 198 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 A0A1W2PR64 198 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 A0A1W2PRV1 198 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 ZNF729A6NN14 1252 aaPredicted RBP13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 GABARAPH6UMI1 98 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 PTHLHP12272 177 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 GATA3P23771 443 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 KIR2DS4P43632 304 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 KIR2DS1Q14954 304 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 CR1LQ2VPA4 569 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 TMEM200BQ69YZ2 307 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 ZNF880Q6PDB4 577 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 SETD6Q8TBK2 473 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 MRGPRDQ8TDS7 321 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 CCDC107Q8WV48 283 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 ZNF714Q96N38 554 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 Q9N2K0 584 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 IFT46Q9NQC8 304 aa13.61□□□□□ -0.23
TSPAN4-208ENST00000409531 ORC5O43913 435 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 SSX5O60225 188 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 FAM157CP0CG43 387 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 ZNF728P0DKX0 622 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 HNF1AP20823 631 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 ACTBP60709 375 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 ACTG1P63261 375 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 SSBP1Q04837 148 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 PYDC2Q56P42 97 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 Q6ZS49 121 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 PRIMA1Q86XR5 153 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 KIR3DL3Q8N743 410 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 OR13A1Q8NGR1 328 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 GPX8Q8TED1 209 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 SMIM4Q8WVI0 70 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 CYYR1Q96J86 154 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 WDR12Q9GZL7 423 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 ZNF286AQ9HBT8 521 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 AKIP1Q9NQ31 210 aa13.6□□□□□ -0.23
TSPAN4-208ENST00000409531 ANK3Q12955 4377 aaKnown RBP13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 KBTBD11-OT1A0A1B0GTJ5 212 aa13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 MEIOCA2RUB1 952 aa13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 M0R1W7 72 aa13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 SPINT2O43291 252 aa13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 GSTZ1O43708 216 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 RBP4P02753 201 aa13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 RCC1P18754 421 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 PAX2Q02962 417 aa13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 ZNF273Q14593 569 aa13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 GDPD1Q8N9F7 314 aa13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 GCDHQ92947 438 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 DACT3Q96B18 629 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 ST6GALNAC5Q9BVH7 336 aa13.59□□□□□ -0.23
TSPAN4-208ENST00000409531 TRAV39A0A0B4J263 110 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 TRDCB7Z8K6 153 aa13.58□□□□□ -0.24
TSPAN4-208ENST00000409531 RBBP9O75884 186 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms