RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 TMEM178BH3BS89 294 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 GYPAP02724 150 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 TK1P04183 234 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 CTXN2P0C2S0 81 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 GLIPR1P48060 266 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 PPOXP50336 477 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 DHODHQ02127 395 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 PAX5Q02548 391 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 EDDM3AQ14507 147 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 C2orf68Q2NKX9 166 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 PRR18Q8N4B5 295 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 OR2AK2Q8NG84 335 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 CCL17Q92583 94 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 SDSLQ96GA7 329 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 SNX22Q96L94 193 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 GAFA1Q96PS6 74 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 OR1A1Q9P1Q5 309 aa11.74□□□□□ -0.53
GPNMB-203ENST00000409458 C14orf166Q9Y224 244 aaKnown RBP11.74□□□□□ -0.53
GPNMB-203ENST00000409458 TRBV6-7A0A0A0MS04 114 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 SMLR1H3BR10 107 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 K7N7A8 449 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 TUSC2O75896 110 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 CTSDP07339 412 aaPredicted RBP11.73□□□□□ -0.53
GPNMB-203ENST00000409458 ZNF728P0DKX0 622 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 ANXA3P12429 323 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 MUC1P15941 1255 aaPredicted RBP11.73□□□□□ -0.53
GPNMB-203ENST00000409458 VAMP1P23763 118 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 NKX2-5P52952 324 aaPredicted RBP11.73□□□□□ -0.53
GPNMB-203ENST00000409458 HERV-K104P61576 105 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 IL13RA1P78552 427 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 ZNF561Q8N587 486 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 SPICQ8N5J4 248 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 UXS1Q8NBZ7 420 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 MRGPRDQ8TDS7 321 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 IL1F10Q8WWZ1 152 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 VRK1Q99986 396 aaPredicted RBP11.73□□□□□ -0.53
GPNMB-203ENST00000409458 TAF9BQ9HBM6 251 aa11.73□□□□□ -0.53
GPNMB-203ENST00000409458 RALYQ9UKM9 306 aaKnown RBP11.73□□□□□ -0.53
GPNMB-203ENST00000409458 HRNRQ86YZ3 2850 aaPredicted RBP11.73□□□□□ -0.53
GPNMB-203ENST00000409458 SPTBN1Q01082 2364 aaKnown RBP11.72□□□□□ -0.53
GPNMB-203ENST00000409458 ZFYVE26Q68DK2 2539 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 FAM172BPA6NC97 362 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 C12orf77C9JDV5 145 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 NPIPB11E5RHQ5 1161 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 LGALS8O00214 317 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 GOSR2O14653 212 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 MGST3O14880 152 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 RPS2P15880 293 aaKnown RBP11.72□□□□□ -0.53
GPNMB-203ENST00000409458 CD34P28906 385 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 SUPT4H1P63272 117 aaKnown RBP11.72□□□□□ -0.53
GPNMB-203ENST00000409458 TMEM128Q5BJH2 165 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 C11orf71Q6IPW1 123 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 H1FOOQ8IZA3 346 aaPredicted RBP11.72□□□□□ -0.53
GPNMB-203ENST00000409458 C1orf87Q8N0U7 546 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 C12orf45Q8N5I9 185 aaPredicted RBP11.72□□□□□ -0.53
GPNMB-203ENST00000409458 FAM216BQ8N7L0 139 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 OR13A1Q8NGR1 328 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 PPP1R35Q8TAP8 253 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 CASTOR1Q8WTX7 329 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 CCL13Q99616 98 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 ZNF436Q9C0F3 470 aaPredicted RBP11.72□□□□□ -0.53
GPNMB-203ENST00000409458 CBLN4Q9NTU7 201 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 PCDHB10Q9UN67 800 aa11.72□□□□□ -0.53
GPNMB-203ENST00000409458 IGKV1D-13A0A0B4J2D9 117 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 IGHV1-69-2A0A0G2JMI3 117 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 MEX3AA1L020 520 aaKnown RBP11.71□□□□□ -0.53
GPNMB-203ENST00000409458 SFT2D2O95562 160 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 DIRAS3O95661 229 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 CD8AP01732 235 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 SOD3P08294 240 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 IGKV1-13P0DP09 117 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 UCP3P55916 312 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 SLC9A3R2Q15599 337 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 ZFP69Q49AA0 526 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 LIN54Q6MZP7 749 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 ZNF788Q6ZQV5 615 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 LDLRAD3Q86YD5 345 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 SLC38A6Q8IZM9 456 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 OR1L1Q8NH94 360 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 OR10J5Q8NHC4 309 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 ZFAND1Q8TCF1 268 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 MITD1Q8WV92 249 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 DCTN5Q9BTE1 182 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 RSRP1Q9BUV0 290 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 ZNF665Q9H7R5 613 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 KCNIP1Q9NZI2 227 aa11.71□□□□□ -0.53
GPNMB-203ENST00000409458 PPIAL4EA0A075B759 164 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 TRAV38-1A0A0B4J264 116 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 ODAMA1E959 279 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 PPIAL4DF5H284 164 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 SIGLEC5O15389 551 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 DANCRP0C864 163 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 PPIAL4FP0DN26 164 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 SSTR5P35346 364 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 P2RX3P56373 397 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 PIGPP57054 158 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 PHLDA2Q53GA4 152 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 C6orf183Q5T699 404 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 CLEC18BQ6UXF7 455 aa11.71□□□□□ -0.54
GPNMB-203ENST00000409458 NLRC3Q7RTR2 1065 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms