RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 OR6C3Q9NZP0 311 aa4.63□□□□□ -1.67
HMGB1P20-201ENST00000402555 DPM3Q9P2X0 92 aa4.63□□□□□ -1.67
HMGB1P20-201ENST00000402555 CKLFQ9UBR5 152 aa4.63□□□□□ -1.67
HMGB1P20-201ENST00000402555 FBLN5Q9UBX5 448 aa4.63□□□□□ -1.67
HMGB1P20-201ENST00000402555 ERGIC3Q9Y282 383 aa4.63□□□□□ -1.67
HMGB1P20-201ENST00000402555 LSM2Q9Y333 95 aaKnown RBP4.63□□□□□ -1.67
HMGB1P20-201ENST00000402555 MINOS1-NBL1R4GNA1 71 aa4.63□□□□□ -1.67
HMGB1P20-201ENST00000402555 TET2Q6N021 2002 aaPredicted RBP4.63□□□□□ -1.67
HMGB1P20-201ENST00000402555 IGHV3-43A0A0B4J1X8 118 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 TMEM30CPA0ZSE6 113 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 SH2D7A6NKC9 451 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM90A22PA8MWA6 464 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 LEUTXA8MZ59 168 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 BUB1B-PAK6H3BSN5 160 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 M0QZ24 198 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 TOR1AO14656 332 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 TIMM23O14925 209 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 CRTAPO75718 401 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 IL1AP01583 271 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 IGLV1-47P01700 117 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 IGHV3-43DP0DP04 118 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 VSIG10L2P0DP72 767 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 GTF2F2P13984 249 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 MGMTP16455 207 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 MYF6P23409 242 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 CD34P28906 385 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 MAP2K4P45985 399 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 DYNLT3P51808 116 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 BLCAPP62952 87 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 SLC35A2P78381 396 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 BDH1Q02338 343 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 DIAPH2-AS1Q14236 149 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 IRF3Q14653 427 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 HERPUD1Q15011 391 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 SPHARQ15513 63 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 MED22Q15528 200 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 HLA-DRB5Q30154 266 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 ACSM3Q53FZ2 586 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 NHLRC3Q5JS37 347 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 RBM48Q5RL73 367 aaKnown RBP4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 TPTE2P1Q5T6R2 138 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 LIPKQ5VXJ0 399 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 OR10K2Q6IF99 312 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 C5orf24Q7Z6I8 188 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 RTN4RL2Q86UN3 420 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 LYPD6Q86Y78 171 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 ZNF565Q8N9K5 539 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 OR2T6Q8NHC8 308 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM110DQ8TAY7 271 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 ZNF596Q8TC21 504 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 MYDGFQ969H8 173 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 TMEM203Q969S6 136 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 FAM46BQ96A09 425 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 RBMXL1Q96E39 390 aaKnown RBP4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 MND1Q9BWT6 205 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 BARHL1Q9BZE3 327 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 SELENOIQ9C0D9 397 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 CCDC90BQ9GZT6 254 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 RANBP3Q9H6Z4 567 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 IFT22Q9H7X7 185 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 RAB18Q9NP72 206 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 SERTAD4Q9NUC0 356 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 MBNL3Q9NUK0 354 aaKnown RBP4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 SCN3BQ9NY72 215 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 IDI2-AS1Q9NZ38 188 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 PSG11Q9UQ72 335 aa4.62□□□□□ -1.67
HMGB1P20-201ENST00000402555 A0A087X0M5 115 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 A0A1B0GX30 115 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 UBE2QL1A1L167 161 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 NPIPB11E5RHQ5 1161 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 H0YHG0 523 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 LY6LH3BQJ8 138 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 C15orf65H3BRN8 121 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 J3QR06 171 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 AIPO00170 330 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 KCNAB3O43448 404 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 RGS10O43665 173 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 ZNF780AO75290 641 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 MPIG6BO95866 241 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 MT-ND4P03905 459 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 CD1AP06126 327 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 HSMCR30P0CW71 290 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 CD28P10747 220 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 MAPK3P27361 379 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 KCNJ3P48549 501 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 PRRX1P54821 245 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 RPS25P62851 125 aaKnown RBP4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 GPR50Q13585 617 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 MPV17LQ2QL34 196 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 NSUN5P1Q3KNT7 163 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 RNLSQ5VYX0 342 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 SIGIRRQ6IA17 410 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 RAB12Q6IQ22 244 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 UNQ9370/PRO34162Q6UXP9 181 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 ZNF497Q6ZNH5 498 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 Q6ZTK2 550 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 CEACAM19Q7Z692 300 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 LRRTM1Q86UE6 522 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 Q8N2B8 174 aa4.61□□□□□ -1.67
HMGB1P20-201ENST00000402555 OR4K15Q8NH41 348 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms