RNA–Protein interactions for RNA: ENST00000402340.2

FAM47DP-201, Transcript of family with sequence similarity 47 member D, pseudogene, humanhuman

BASIC

Gene FAM47DP, Length 3,290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DP-201ENST00000402340 SPIN3Q5JUX0 258 aa10.66□□□□□ -0.7
FAM47DP-201ENST00000402340 YRDCQ86U90 279 aaKnown RBP10.66□□□□□ -0.7
FAM47DP-201ENST00000402340 CMTM1Q8IZ96 169 aa10.66□□□□□ -0.7
FAM47DP-201ENST00000402340 OR10D3Q8NH80 312 aa10.66□□□□□ -0.7
FAM47DP-201ENST00000402340 MBD3L1Q8WWY6 194 aa10.66□□□□□ -0.7
FAM47DP-201ENST00000402340 RIMS4Q9H426 269 aaPredicted RBP10.66□□□□□ -0.7
FAM47DP-201ENST00000402340 PRDM6Q9NQX0 595 aa10.66□□□□□ -0.7
FAM47DP-201ENST00000402340 GAR1Q9NY12 217 aaKnown RBP10.66□□□□□ -0.7
FAM47DP-201ENST00000402340 MTCH1Q9NZJ7 389 aa10.66□□□□□ -0.7
FAM47DP-201ENST00000402340 KLK3P07288 261 aaPredicted RBP10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 PMS2P11Q13670 270 aa10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 OR2B11Q5JQS5 317 aa10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 ZNF324BQ6AW86 544 aaPredicted RBP10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 LINC00596Q86U02 117 aa10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 RCC1LQ96I51 464 aaKnown RBP10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 OPA3Q9H6K4 179 aa10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 CRIM1Q9NZV1 1036 aa10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 TGIF2-C20orf24A0A0A6YYL0 155 aa10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 A0A0G2JRQ6 117 aa10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 F10P00742 488 aa10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 RFPL3SP0C7P2 107 aa10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 MRPL30Q8TCC3 161 aaKnown RBP10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 WNT16Q9UBV4 365 aa10.65□□□□□ -0.7
FAM47DP-201ENST00000402340 TNRC6AQ8NDV7 1962 aaKnown RBP10.65□□□□□ -0.71
FAM47DP-201ENST00000402340 IGKV3D-15A0A087WSY6 115 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 ELOA3CA0A087WX78 387 aaPredicted RBP10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 RPL23AP62750 156 aaKnown RBP10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 ZFP36L1Q07352 338 aaKnown RBP10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 PNRC1Q12796 327 aaPredicted RBP10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 PRDX4Q13162 271 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 SPNS3Q6ZMD2 512 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 TMEM217Q8N7C4 229 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 RAB40CQ96S21 281 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 GPHA2Q96T91 129 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 CABLES2Q9BTV7 478 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 LINC00470Q9BZP3 86 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 NOSIPQ9Y314 301 aaKnown RBP10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 NPIPB11E5RHQ5 1161 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 COX5BP10606 129 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 GFRA1P56159 465 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 NDUFA6P56556 154 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 OR56B2PQ8NGI1 322 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 GPR146Q96CH1 333 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 PSMG3Q9BT73 122 aaPredicted RBP10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 PARD6GQ9BYG4 376 aaPredicted RBP10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 NTN3O00634 580 aaPredicted RBP10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 YKT6O15498 198 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 TGOLN2O43493 480 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 ITGA3P26006 1051 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 HAAOP46952 286 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 ZNF674Q2M3X9 581 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 HIST3H2BBQ8N257 126 aa10.64□□□□□ -0.71
FAM47DP-201ENST00000402340 NCKAP5O14513 1909 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 TRBV23-1A0A0A0MS06 115 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 C20orf204Q6ZNR8 217 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 STX12Q86Y82 276 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 LSM10Q969L4 123 aaKnown RBP10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 P2RX4Q99571 388 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 PRDM13Q9H4Q3 707 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 IL36RNQ9UBH0 155 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 OR2W1Q9Y3N9 320 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 C9J4A7 227 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 IGLV2-14P01704 120 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 P04436 131 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 CD81P60033 236 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 TRA2AQ13595 282 aaKnown RBP eCLIP10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 ZNF726P1Q15940 193 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 MKXQ8IYA7 352 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 ABHD5Q8WTS1 349 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 CA5BP1Q8WTZ4 195 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 PLK3Q9H4B4 646 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 RNF150Q9ULK6 438 aa10.63□□□□□ -0.71
FAM47DP-201ENST00000402340 CYB5R3P00387 301 aaPredicted RBP10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 SOD3P08294 240 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 BCL2P10415 239 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 S100A2P29034 98 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 CD200P41217 278 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 CXCL12P48061 93 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 ZDHHC23Q8IYP9 409 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 BATF2Q8N1L9 274 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 IFI44Q8TCB0 444 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 CABIN1Q9Y6J0 2220 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 TRBV24-1A0A075B6N3 115 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 TRGC2P03986 189 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 HIST1H1BP16401 226 aaKnown RBP10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 GPM6AP51674 278 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 Q0VFX4 171 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 HLA-BQ31612 363 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 LYSMD4Q5XG99 296 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 Q6ZRM9 215 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 OR5A2Q8NGI9 324 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 ABHD3Q8WU67 409 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 SDF2L1Q9HCN8 221 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 RPRMQ9NS64 109 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 CYB5BO43169 146 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 IGKV1-39P01597 117 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 IGKV1D-39P04432 117 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 SLC23A3Q6PIS1 610 aa10.62□□□□□ -0.71
FAM47DP-201ENST00000402340 THNSL2Q86YJ6 484 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms